Skip to main content

2023 | OriginalPaper | Buchkapitel

Nitrofuran Antibiotics and Their Derivatives: A Computational Chemistry Analysis

verfasst von : Ana Paola Leyva-Aizpuru, Yoshua Alberto Quezada-García, Graciela Ramirez-Alonso, Luis Carlos Hinojos-Gallardo, Javier Camarillo-Cisneros

Erschienen in: XLV Mexican Conference on Biomedical Engineering

Verlag: Springer International Publishing

Aktivieren Sie unsere intelligente Suche, um passende Fachinhalte oder Patente zu finden.

search-config
loading …

Abstract

Due to the accelerated emergence of drug-resistant bacterial strains, better techniques are needed to enable intelligent antibiotic design. In 2019, drug-resistant bacterial strains were the direct cause of at least 1.27 million deaths internationally. Thus, new strategies are being developed for a faster and more cost-effective process focusing on analyzing so-called older antibiotics. Nitrofurans are documented as the family of antibiotics least prone to bacterial resistance. Therefore, they are molecules from which we can learn by analyzing their structure along with their action mechanism. In this work, we use computational chemistry to calculate the minimum conformations energies, highest occupied molecular orbital, lowest unoccupied molecular orbital, and gaps energies of nitrofurans and their derivative products. Subsequently, the structure of each molecule and its charge distribution were analyzed to understand their reactivity. The charge distribution in the nitrofurans and their nitroso derivatives was concentrated in the Furan-nitro group, which explains the antibacterial properties.

Sie haben noch keine Lizenz? Dann Informieren Sie sich jetzt über unsere Produkte:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Literatur
1.
Zurück zum Zitat Centers for Disease Control and Prevention: «Antibiotic Resistance Threats Report,» de Atlanta: Centers For Disease Control And Prevention, Atlanta (2019) Centers for Disease Control and Prevention: «Antibiotic Resistance Threats Report,» de Atlanta: Centers For Disease Control And Prevention, Atlanta (2019)
2.
Zurück zum Zitat Hasan, C., Dutta, D., Nguyen, N.: Revisiting Antibiotic Resistance: Mechanistic Foundations to Evolutionary Outlook. Antibiotics 11(40), 23 (2021) Hasan, C., Dutta, D., Nguyen, N.: Revisiting Antibiotic Resistance: Mechanistic Foundations to Evolutionary Outlook. Antibiotics 11(40), 23 (2021)
3.
Zurück zum Zitat Errecalde, J.: Uso de antimicrobianos en animales de consumo. Incidencia del desarrollo de resistencias en salud pública. Universidad Nacional de la Plata, La plata (2004) Errecalde, J.: Uso de antimicrobianos en animales de consumo. Incidencia del desarrollo de resistencias en salud pública. Universidad Nacional de la Plata, La plata (2004)
4.
Zurück zum Zitat Macalino, S.J., Gosu, V., Hong, S., Choi, S.: Role of computer-aided drug design in modern drug Discovery. Archives of Pharmacal Research 38(9), 1686–1701 (2015) Macalino, S.J., Gosu, V., Hong, S., Choi, S.: Role of computer-aided drug design in modern drug Discovery. Archives of Pharmacal Research 38(9), 1686–1701 (2015)
5.
Zurück zum Zitat Willems, H., De Cesco, S., Svensson, F.: Computational Chemistry on a budget: supporting drug discovery with limited resources. Journal of Medicinal Chemistry 63(18), 10158–10169 (April 2020) Willems, H., De Cesco, S., Svensson, F.: Computational Chemistry on a budget: supporting drug discovery with limited resources. Journal of Medicinal Chemistry 63(18), 10158–10169 (April 2020)
6.
Zurück zum Zitat Theuretzbacher, U., et al.: Reviving old antibiotics. J Antimicrob Chemother 70(8), 2177–2181 (2015) Theuretzbacher, U., et al.: Reviving old antibiotics. J Antimicrob Chemother 70(8), 2177–2181 (2015)
7.
Zurück zum Zitat Rezaei, S., Akbari, S., Rahmani, F., Varnousfaderani, S., Gomroki, S., Jafarzadeh, E.: Nitrofurans as Potent Antibacterial Agents: A Systematic Review of Literature. Int. J. Adv. Biologi. Biomed. Res. 10(2), 126–138 (2022) Rezaei, S., Akbari, S., Rahmani, F., Varnousfaderani, S., Gomroki, S., Jafarzadeh, E.: Nitrofurans as Potent Antibacterial Agents: A Systematic Review of Literature. Int. J. Adv. Biologi. Biomed. Res. 10(2), 126–138 (2022)
8.
Zurück zum Zitat Le, V., Davies, I., Moon, C., Biggs, W.D.P., Rakonjac, J.: Novel 5-nitrofuran-activating reductase in Escherichia coli. Antimicrob Agents Chemother 63(11), 868–919 (2019) Le, V., Davies, I., Moon, C., Biggs, W.D.P., Rakonjac, J.: Novel 5-nitrofuran-activating reductase in Escherichia coli. Antimicrob Agents Chemother 63(11), 868–919 (2019)
9.
Zurück zum Zitat Zuma, N., Aucamp, J., N´Da, D.: An update on derivatisation and repurposing of clinical nitrofuran drugs. European Journal of Pharmaceutical Sciences 140, 13 (2019) Zuma, N., Aucamp, J., N´Da, D.: An update on derivatisation and repurposing of clinical nitrofuran drugs. European Journal of Pharmaceutical Sciences 140, 13 (2019)
10.
Zurück zum Zitat Brunton, L., Chabner, B., Knollmann, B.: Goodman & Gilman´s The Pharmacological Basis of Therapeutics. Mc Graw Hill, New York (2020) Brunton, L., Chabner, B., Knollmann, B.: Goodman & Gilman´s The Pharmacological Basis of Therapeutics. Mc Graw Hill, New York (2020)
11.
Zurück zum Zitat Murugasu-OEI, B., Dick, T.: Bactericidal activity of nitrofurans against growing and dormant Mycobacterium bovis BCG. The Journal of antimicrobial Chemotherapy 46(6), 917–920 (2000) Murugasu-OEI, B., Dick, T.: Bactericidal activity of nitrofurans against growing and dormant Mycobacterium bovis BCG. The Journal of antimicrobial Chemotherapy 46(6), 917–920 (2000)
12.
Zurück zum Zitat Bot, C., et al.: Evaluating 5-Nitrofurans as Trypanocidal Agents. Antimicrobial Agents and Chemotherapy 57(4), 1638–1647 (2013) Bot, C., et al.: Evaluating 5-Nitrofurans as Trypanocidal Agents. Antimicrobial Agents and Chemotherapy 57(4), 1638–1647 (2013)
13.
Zurück zum Zitat Le, V., Rakonjac, J.: Nitrofurans: Revival of an “old” drug class in the fight against antibiotic resistance. Plos Pathogens 17(7), 7–8 (2021) Le, V., Rakonjac, J.: Nitrofurans: Revival of an “old” drug class in the fight against antibiotic resistance. Plos Pathogens 17(7), 7–8 (2021)
14.
Zurück zum Zitat Willems, H., De Cesco, S., Svensson, F.: Computational chemistry on a budget: supporting drug discovery with limited resources. Journal of Medicinal Chemistry 63(18), 10158–10169 (2020) Willems, H., De Cesco, S., Svensson, F.: Computational chemistry on a budget: supporting drug discovery with limited resources. Journal of Medicinal Chemistry 63(18), 10158–10169 (2020)
15.
Zurück zum Zitat Magos, G., Lorenzana, M.: Las fases en el desarrollo de nuevos medicamentos. Revista de la Facultad de Medicina de la UNAM 52(6), 260–264 (2009 Diciembre) Magos, G., Lorenzana, M.: Las fases en el desarrollo de nuevos medicamentos. Revista de la Facultad de Medicina de la UNAM 52(6), 260–264 (2009 Diciembre)
16.
Zurück zum Zitat Deriabina, A., Ledesma, J.O., González, E., Herrera, J.N., Poltev, V.: Desarrollo de un campo de fuerzas de mecanica molecular `para la interaccion de Na+ con agua. Revista Mexicana de Fisica 52(1), 74–79 (2006 Febrero) Deriabina, A., Ledesma, J.O., González, E., Herrera, J.N., Poltev, V.: Desarrollo de un campo de fuerzas de mecanica molecular `para la interaccion de Na+ con agua. Revista Mexicana de Fisica 52(1), 74–79 (2006 Febrero)
17.
Zurück zum Zitat Wouters, O., Mcnkee, M., Luyten, J.: Estimated research and development investment needed to bring a new medicine to market, 2009–2018. Journal of the American Medical Association 323(9), 844–853 (2020) Wouters, O., Mcnkee, M., Luyten, J.: Estimated research and development investment needed to bring a new medicine to market, 2009–2018. Journal of the American Medical Association 323(9), 844–853 (2020)
18.
Zurück zum Zitat Day, M., et al.: The structures of E. coli NfsA bound to the antibiotic nitrofurantoin; to 1,4-benzoquinone and to FMN. Biochemical Journal 478(13), 2601–2617 (2021) Day, M., et al.: The structures of E. coli NfsA bound to the antibiotic nitrofurantoin; to 1,4-benzoquinone and to FMN. Biochemical Journal 478(13), 2601–2617 (2021)
19.
Zurück zum Zitat Manin, A., Drozd, K., Voronin, A., Churakov, A., Perlovich, G.: A combined experimental and theoretical study of nitrofuran antibiotics: crystal structures, DFT computations, sublimation and solution thermodynamics. Molecules 26(11), 20 (2021) Manin, A., Drozd, K., Voronin, A., Churakov, A., Perlovich, G.: A combined experimental and theoretical study of nitrofuran antibiotics: crystal structures, DFT computations, sublimation and solution thermodynamics. Molecules 26(11), 20 (2021)
21.
Zurück zum Zitat Rackers, J., et al.: Tinker 8: Software Tools for Molecular Design. Journal of Chemcial Theory and Computation 14(10), 5273–5289 (2018 February) Rackers, J., et al.: Tinker 8: Software Tools for Molecular Design. Journal of Chemcial Theory and Computation 14(10), 5273–5289 (2018 February)
22.
Zurück zum Zitat Chiodo, S., Russo, N., Sicilia, E.: LANL2DZ basis sets recontracted in the framework of density functional theory. The Journal of Chemical Physics 125(10), 104107–104115 (2006) Chiodo, S., Russo, N., Sicilia, E.: LANL2DZ basis sets recontracted in the framework of density functional theory. The Journal of Chemical Physics 125(10), 104107–104115 (2006)
23.
Zurück zum Zitat Zhao, Y., Truhlar, D.: The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: two new functionals and systematic testing of four M06-class functionals. Theoretical Chemistry Accounts 120(1), 215–241 (2008) Zhao, Y., Truhlar, D.: The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: two new functionals and systematic testing of four M06-class functionals. Theoretical Chemistry Accounts 120(1), 215–241 (2008)
24.
Zurück zum Zitat Blum, V., et al.: Ab initio molecular simulations with numeric atom-centered orbitals. Computer Physics Communications 180(11), 2175–2196 (2009) Blum, V., et al.: Ab initio molecular simulations with numeric atom-centered orbitals. Computer Physics Communications 180(11), 2175–2196 (2009)
25.
Zurück zum Zitat Schlegel, H.: Geometry optimization. Wiley Interdisciplinary Reviews: Computational Molecular Science 1(5), 790–809 (2011) Schlegel, H.: Geometry optimization. Wiley Interdisciplinary Reviews: Computational Molecular Science 1(5), 790–809 (2011)
26.
Zurück zum Zitat Jensen, F.: Molecular Properties, de Introduction to Computational Chemistry, pp. 315–349. John Wiley & Sons Ltd, West Sussex (2007) Jensen, F.: Molecular Properties, de Introduction to Computational Chemistry, pp. 315–349. John Wiley & Sons Ltd, West Sussex (2007)
27.
Zurück zum Zitat Tandon, P., Khan, E.: Structural and Reactivity Analyses of Nitrofurantoin–4-dimethylaminopyridine Using Spectroscopic and DFT. Crystals 9(413), 14 (2019) Tandon, P., Khan, E.: Structural and Reactivity Analyses of Nitrofurantoin–4-dimethylaminopyridine Using Spectroscopic and DFT. Crystals 9(413), 14 (2019)
28.
Zurück zum Zitat Fariña, N.: Resistencia bacteriana: un problema de salud pública mundial de difícil solución. Memórias del Instituto de Investigaciones en Ciencias de la Salud 14(1), 4–5 (2016) Fariña, N.: Resistencia bacteriana: un problema de salud pública mundial de difícil solución. Memórias del Instituto de Investigaciones en Ciencias de la Salud 14(1), 4–5 (2016)
29.
Zurück zum Zitat Tathe, A., Gupta, V., Sekar, N.: Synthesis and combined experimental and computational investigations on spectroscopic and photophysical properties of red emitting 3-styryl coumarins. Dyes and Pigments 119(1), 49–55 (2015) Tathe, A., Gupta, V., Sekar, N.: Synthesis and combined experimental and computational investigations on spectroscopic and photophysical properties of red emitting 3-styryl coumarins. Dyes and Pigments 119(1), 49–55 (2015)
30.
Zurück zum Zitat Elhassanny, R.V.D.-A.A.A.E.: Drugs Targeting Bacterial DNA, de Brody's Human Pharmacology, pp. 508–516. Elsevier Inc., Philadelphia (2019) Elhassanny, R.V.D.-A.A.A.E.: Drugs Targeting Bacterial DNA, de Brody's Human Pharmacology, pp. 508–516. Elsevier Inc., Philadelphia (2019)
31.
Zurück zum Zitat Saha, M., Sarkar, A.: Review on multiple facets of drug resistance: a rising challenge in the 21st century. Jorunal of Xenobiotics 11, 197–214 (2021) Saha, M., Sarkar, A.: Review on multiple facets of drug resistance: a rising challenge in the 21st century. Jorunal of Xenobiotics 11, 197–214 (2021)
Metadaten
Titel
Nitrofuran Antibiotics and Their Derivatives: A Computational Chemistry Analysis
verfasst von
Ana Paola Leyva-Aizpuru
Yoshua Alberto Quezada-García
Graciela Ramirez-Alonso
Luis Carlos Hinojos-Gallardo
Javier Camarillo-Cisneros
Copyright-Jahr
2023
DOI
https://doi.org/10.1007/978-3-031-18256-3_20

Neuer Inhalt