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2018 | OriginalPaper | Buchkapitel

Omni-Supervised Learning: Scaling Up to Large Unlabelled Medical Datasets

verfasst von : Ruobing Huang, J. Alison Noble, Ana I. L. Namburete

Erschienen in: Medical Image Computing and Computer Assisted Intervention – MICCAI 2018

Verlag: Springer International Publishing

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Abstract

Two major bottlenecks in increasing algorithmic performance in the field of medical imaging analysis are the typically limited size of datasets and the shortage of expert labels for large datasets. This paper investigates approaches to overcome the latter via omni-supervised learning: a special case of semi-supervised learning. Our approach seeks to exploit a small annotated dataset and iteratively increase model performance by scaling up to refine the model using a large set of unlabelled data. By fusing predictions of perturbed inputs, the method generates new training annotations without human intervention. We demonstrate the effectiveness of the proposed framework to localize multiple structures in a 3D US dataset of 4044 fetal brain volumes with an initial expert annotation of just 200 volumes (5% in total) in training. Results show that structure localization error was reduced from 2.07 ± 1.65 mm to 1.76 ± 1.35 mm on the hold-out validation set.

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Literatur
1.
2.
Zurück zum Zitat Radosavovic, I., Dollár, P., Girshick, R., Gkioxari, G., He, K.: Data distillation: Towards omni-supervised learning. arXiv preprint arXiv:1712.04440 (2017) Radosavovic, I., Dollár, P., Girshick, R., Gkioxari, G., He, K.: Data distillation: Towards omni-supervised learning. arXiv preprint arXiv:​1712.​04440 (2017)
4.
Zurück zum Zitat Bucila, C., Caruana, R., Niculescu-Mizil, A.: Model compression: making big, slow models practical. In: Proceedings of the 12th International Conference on Knowledge Discovery and Data Mining (KDD 2006) (2006) Bucila, C., Caruana, R., Niculescu-Mizil, A.: Model compression: making big, slow models practical. In: Proceedings of the 12th International Conference on Knowledge Discovery and Data Mining (KDD 2006) (2006)
5.
Zurück zum Zitat Girshick, R., Donahue, J., Darrell, T., Malik, J.: Rich feature hierarchies for accurate object detection and semantic segmentation. In: CVPR (2014) Girshick, R., Donahue, J., Darrell, T., Malik, J.: Rich feature hierarchies for accurate object detection and semantic segmentation. In: CVPR (2014)
6.
Zurück zum Zitat He, K., Gkioxari, G., Dollár, P., Girshick, R.: Mask R-CNN. In: 2017 IEEE International Conference on Computer Vision (ICCV), pp. 2980–2988. IEEE (2017) He, K., Gkioxari, G., Dollár, P., Girshick, R.: Mask R-CNN. In: 2017 IEEE International Conference on Computer Vision (ICCV), pp. 2980–2988. IEEE (2017)
7.
Zurück zum Zitat Çiçek, Ö., Abdulkadir, A., Lienkamp, S.S., Brox, T., Ronneberger, O.: 3D U-Net: Learning dense volumetric segmentation from sparse annotation. In: Ourselin, S., Joskowicz, L., Sabuncu, M.R., Unal, G., Wells, W. (eds.) MICCAI 2016. LNCS, vol. 9901, pp. 424–432. Springer, Cham (2016). https://doi.org/10.1007/978-3-319-46723-8_49CrossRef Çiçek, Ö., Abdulkadir, A., Lienkamp, S.S., Brox, T., Ronneberger, O.: 3D U-Net: Learning dense volumetric segmentation from sparse annotation. In: Ourselin, S., Joskowicz, L., Sabuncu, M.R., Unal, G., Wells, W. (eds.) MICCAI 2016. LNCS, vol. 9901, pp. 424–432. Springer, Cham (2016). https://​doi.​org/​10.​1007/​978-3-319-46723-8_​49CrossRef
8.
Zurück zum Zitat Sofka, M., Zhang, J., Good, S., Zhou, S.K., Comaniciu, D.: Automatic detection and measurement of structures in fetal head ultrasound volumes using sequential estimation and integrated detection network (IDN). IEEE TMI 33(5), 1054–1070 (2014) Sofka, M., Zhang, J., Good, S., Zhou, S.K., Comaniciu, D.: Automatic detection and measurement of structures in fetal head ultrasound volumes using sequential estimation and integrated detection network (IDN). IEEE TMI 33(5), 1054–1070 (2014)
9.
Zurück zum Zitat Huang, R., Xie, W., Noble, J.A.: VP-Nets: efficient automatic localization of key brain structures in 3D fetal neurosonography. Med. Image Anal. 47, 127–139 (2018)CrossRef Huang, R., Xie, W., Noble, J.A.: VP-Nets: efficient automatic localization of key brain structures in 3D fetal neurosonography. Med. Image Anal. 47, 127–139 (2018)CrossRef
10.
Zurück zum Zitat Papageorghiou, A.T.: International standards for fetal growth based on serial ultrasound measurements: the fetal growth longitudinal study of the intergrowth-21st project. Lancet 384(9946), 869–879 (2014)CrossRef Papageorghiou, A.T.: International standards for fetal growth based on serial ultrasound measurements: the fetal growth longitudinal study of the intergrowth-21st project. Lancet 384(9946), 869–879 (2014)CrossRef
Metadaten
Titel
Omni-Supervised Learning: Scaling Up to Large Unlabelled Medical Datasets
verfasst von
Ruobing Huang
J. Alison Noble
Ana I. L. Namburete
Copyright-Jahr
2018
DOI
https://doi.org/10.1007/978-3-030-00928-1_65