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2020 | OriginalPaper | Buchkapitel

Semantic Representations of Terms in Traditional Chinese Medicine

verfasst von : Qinan Hu, Ling Zhu, Feng Yang, Jinghua Li, Qi Yu, Ye Tian, Tong Yu, Yueguo Gu

Erschienen in: Chinese Lexical Semantics

Verlag: Springer International Publishing

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Abstract

Word embeddings have been widely used in lexical semantics and neural networks in Natural Language Processing. This article investigates the semantic representations using word embedding technologies by verifying them on a human constructed domain ontology. The domain of Traditional Chinese Medicine (TCM) is used as a workbench in this study, because this domain is knowledge-rich and has a large-scale domain ontology with well-defined entity types and relation types. This article releases a dataset, named “TCMSem”, to capture TCM domain experts’ intuitions of semantic relatedness. This data set is designed to cover the medical entities and relations with as many semantic types as possible so as to initiate a diverse and comprehensive evaluation on word embeddings. Experimental results show that word embeddings have demonstrated higher proficiencies in the detection of synonyms and collocations than other types of semantic relations. Furthermore, the semantic relatedness of thousands of terms of major categories in TCM is visualized using the taxonomy defined in the ontology.

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Literatur
1.
Zurück zum Zitat Joulin, A., Grave, E., Bojanowski, P., Mikolov, T.: Bag of tricks for efficient text classification, arXiv preprint arXiv:1607.01759 Joulin, A., Grave, E., Bojanowski, P., Mikolov, T.: Bag of tricks for efficient text classification, arXiv preprint arXiv:​1607.​01759
2.
Zurück zum Zitat Li, J., Monroe, W., Ritter, A., Galley, M., Gao, J., Jurafsky, D.: Deep reinforcement learning for dialogue generation, arXiv preprint arXiv:1606.01541 Li, J., Monroe, W., Ritter, A., Galley, M., Gao, J., Jurafsky, D.: Deep reinforcement learning for dialogue generation, arXiv preprint arXiv:​1606.​01541
3.
Zurück zum Zitat Klein, G., Kim, Y., Deng, Y., Senellart, J., Rush, A.M., OpenNMT: open-source toolkit for neural machine translation, arXiv preprint arXiv:1701.02810 Klein, G., Kim, Y., Deng, Y., Senellart, J., Rush, A.M., OpenNMT: open-source toolkit for neural machine translation, arXiv preprint arXiv:​1701.​02810
4.
Zurück zum Zitat Lin, Y., Liu, Z., Sun, M., Liu, Y., Zhu, X.: Learning entity and relation embeddings for knowledge graph completion, In: AAAI, vol. 15, pp. 2181–2187 (2015) Lin, Y., Liu, Z., Sun, M., Liu, Y., Zhu, X.: Learning entity and relation embeddings for knowledge graph completion, In: AAAI, vol. 15, pp. 2181–2187 (2015)
5.
Zurück zum Zitat Li, S., Zhao, Z., Hu, R., Li, W., Liu, T., Du, X.: Analogical reasoning on chinese morphological and semantic relations. In: ACL 2018 (2018) Li, S., Zhao, Z., Hu, R., Li, W., Liu, T., Du, X.: Analogical reasoning on chinese morphological and semantic relations. In: ACL 2018 (2018)
6.
Zurück zum Zitat Bodenreider, O.: The unified medical language system (UMLS): integrating biomedical terminology. Nucl. Acids Res. 32(suppl\(\_\)1), D267–D270 (2004)CrossRef Bodenreider, O.: The unified medical language system (UMLS): integrating biomedical terminology. Nucl. Acids Res. 32(suppl\(\_\)1), D267–D270 (2004)CrossRef
7.
Zurück zum Zitat McCray, A.T.: The UMLS semantic network. In: Proceedings, Symposium on Computer Applications in Medical Care, American Medical Informatics Association, pp. 503–507 (1989) McCray, A.T.: The UMLS semantic network. In: Proceedings, Symposium on Computer Applications in Medical Care, American Medical Informatics Association, pp. 503–507 (1989)
8.
Zurück zum Zitat Chen, H., et al.: Towards a semantic web of relational databases: a practical semantic toolkit and an in-use case from traditional Chinese medicine. In: Cruz, I., et al. (eds.) ISWC 2006. LNCS, vol. 4273, pp. 750–763. Springer, Heidelberg (2006). https://doi.org/10.1007/11926078_54CrossRef Chen, H., et al.: Towards a semantic web of relational databases: a practical semantic toolkit and an in-use case from traditional Chinese medicine. In: Cruz, I., et al. (eds.) ISWC 2006. LNCS, vol. 4273, pp. 750–763. Springer, Heidelberg (2006). https://​doi.​org/​10.​1007/​11926078_​54CrossRef
9.
Zurück zum Zitat Wang, Y., Yu, Z., Jiang, Y., Xu, K., Chen, X.: Automatic symptom name normalization in clinical records of traditional Chinese medicine. BMC Bioinform. 11(1), 40 (2010)CrossRef Wang, Y., Yu, Z., Jiang, Y., Xu, K., Chen, X.: Automatic symptom name normalization in clinical records of traditional Chinese medicine. BMC Bioinform. 11(1), 40 (2010)CrossRef
10.
Zurück zum Zitat Wu, Z., Chen, H., Jiang X.: Modern Computational Approaches to Traditional Chinese Medicine. Elsevier (2012) Wu, Z., Chen, H., Jiang X.: Modern Computational Approaches to Traditional Chinese Medicine. Elsevier (2012)
11.
Zurück zum Zitat Gu, P., Chen, H., Yu, T.: Ontology-oriented diagnostic system for traditional Chinese medicine based on relation refinement. In: Computational and Mathematical Methods in Medicine (2013)MathSciNetCrossRef Gu, P., Chen, H., Yu, T.: Ontology-oriented diagnostic system for traditional Chinese medicine based on relation refinement. In: Computational and Mathematical Methods in Medicine (2013)MathSciNetCrossRef
12.
Zurück zum Zitat Ruan, T., et al.: An automatic approach for constructing a knowledge base of symptoms in Chinese. J. Biomed. Semant. 8(1), 33 (2017)CrossRef Ruan, T., et al.: An automatic approach for constructing a knowledge base of symptoms in Chinese. J. Biomed. Semant. 8(1), 33 (2017)CrossRef
13.
Zurück zum Zitat Ballatore, A., Bertolotto, M., Wilson, D.C.: An evaluative baseline for geo-semantic relatedness and similarity. GeoInformatica 18(4), 747–767 (2014)CrossRef Ballatore, A., Bertolotto, M., Wilson, D.C.: An evaluative baseline for geo-semantic relatedness and similarity. GeoInformatica 18(4), 747–767 (2014)CrossRef
14.
Zurück zum Zitat Cui, M., et al.: Current status of traditional Chinese medicine language system. In: Li, Shaozi, Jin, Qun, Jiang, Xiaohong, Park, James J.(Jong Hyuk) (eds.) Frontier and Future Development of Information Technology in Medicine and Education. LNEE, vol. 269, pp. 2287–2292. Springer, Dordrecht (2014). https://doi.org/10.1007/978-94-007-7618-0_280CrossRef Cui, M., et al.: Current status of traditional Chinese medicine language system. In: Li, Shaozi, Jin, Qun, Jiang, Xiaohong, Park, James J.(Jong Hyuk) (eds.) Frontier and Future Development of Information Technology in Medicine and Education. LNEE, vol. 269, pp. 2287–2292. Springer, Dordrecht (2014). https://​doi.​org/​10.​1007/​978-94-007-7618-0_​280CrossRef
15.
Zurück zum Zitat Yu, T., Cui, M., Li, H.-Y., et al.: Semantic network framework of traditional Chinese medicine language system: an upper-level ontology for traditional Chinese medicine. China Digit. Med. 9, 44–47 (2014) Yu, T., Cui, M., Li, H.-Y., et al.: Semantic network framework of traditional Chinese medicine language system: an upper-level ontology for traditional Chinese medicine. China Digit. Med. 9, 44–47 (2014)
16.
17.
Zurück zum Zitat Mikolov, T., Sutskever, I., Chen, K., Corrado, G.S., Dean, J.: Distributed representations of words and phrases and their compositionality. In: Advances in Neural Information Processing Systems, pp. 3111–3119 (2013) Mikolov, T., Sutskever, I., Chen, K., Corrado, G.S., Dean, J.: Distributed representations of words and phrases and their compositionality. In: Advances in Neural Information Processing Systems, pp. 3111–3119 (2013)
18.
Zurück zum Zitat Pennington, J., Socher, R., Manning, C.: Glove: global vectors for word representation. In: Proceedings of the 2014 Conference on Empirical Methods in Natural Language Processing (EMNLP), pp. 1532–1543 (2014) Pennington, J., Socher, R., Manning, C.: Glove: global vectors for word representation. In: Proceedings of the 2014 Conference on Empirical Methods in Natural Language Processing (EMNLP), pp. 1532–1543 (2014)
19.
Zurück zum Zitat Bojanowski, P., Grave, E., Joulin, A., Mikolov, T.: Enriching word vectors with subword information, arXiv preprint arXiv:1607.04606 Bojanowski, P., Grave, E., Joulin, A., Mikolov, T.: Enriching word vectors with subword information, arXiv preprint arXiv:​1607.​04606
21.
Zurück zum Zitat Jacob, D., et al.: Bert: pre-training of deep bidirectional transformers for language understanding. arXiv preprint arXiv:1810.04805 (2018) Jacob, D., et al.: Bert: pre-training of deep bidirectional transformers for language understanding. arXiv preprint arXiv:​1810.​04805 (2018)
22.
Zurück zum Zitat Zhu, W., Zhang, W., Li, G.-Z., He, C., Zhang, L., et al.: A study of damp-heat syndrome classification using word2vec and TF-IDF. In: 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). IEEE, pp. 1415–1420 (2016) Zhu, W., Zhang, W., Li, G.-Z., He, C., Zhang, L., et al.: A study of damp-heat syndrome classification using word2vec and TF-IDF. In: 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). IEEE, pp. 1415–1420 (2016)
23.
Zurück zum Zitat Yao, L., Zhang, Y., Wei, B., Li, Z., Huang, X.: Traditional Chinese medicine clinical records classification using knowledge-powered document embedding. In: 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). IEEE, pp. 1926–1928 (2016) Yao, L., Zhang, Y., Wei, B., Li, Z., Huang, X.: Traditional Chinese medicine clinical records classification using knowledge-powered document embedding. In: 2016 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). IEEE, pp. 1926–1928 (2016)
24.
Zurück zum Zitat Zhou, X., Peng, Y., Liu, B.: Text mining for traditional Chinese medical knowledge discovery: a survey. J. Biomed. Inform. 43, 650–660 (2010)CrossRef Zhou, X., Peng, Y., Liu, B.: Text mining for traditional Chinese medical knowledge discovery: a survey. J. Biomed. Inform. 43, 650–660 (2010)CrossRef
25.
Zurück zum Zitat Zhou, Xuezhong, Liu, Baoyan, Zhang, Xiaoping, Xie, Qi, Zhang, Runshun, Wang, Yinghui, Peng, Yonghong: Data mining in real-world traditional chinese medicine clinical data warehouse. In: Poon, Josiah, Poon, Simon K. (eds.) Data Analytics for Traditional Chinese Medicine Research, pp. 189–213. Springer, Cham (2014). https://doi.org/10.1007/978-3-319-03801-8_11CrossRef Zhou, Xuezhong, Liu, Baoyan, Zhang, Xiaoping, Xie, Qi, Zhang, Runshun, Wang, Yinghui, Peng, Yonghong: Data mining in real-world traditional chinese medicine clinical data warehouse. In: Poon, Josiah, Poon, Simon K. (eds.) Data Analytics for Traditional Chinese Medicine Research, pp. 189–213. Springer, Cham (2014). https://​doi.​org/​10.​1007/​978-3-319-03801-8_​11CrossRef
26.
Zurück zum Zitat Baroni, M., Dinu, G., Kruszewski, G.: Don’t count, predict! a systematic comparison of context-counting vs. context-predicting semantic vectors, In: Proceedings of the 52nd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), vol. 1, pp. 238–247 (2014) Baroni, M., Dinu, G., Kruszewski, G.: Don’t count, predict! a systematic comparison of context-counting vs. context-predicting semantic vectors, In: Proceedings of the 52nd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), vol. 1, pp. 238–247 (2014)
27.
Zurück zum Zitat Schnabel, T., Labutov, I., Mimno, D., Joachims, T.: Evaluation methods for unsupervised word embeddings. In: Proceedings of the 2015 Conference on Empirical Methods in Natural Language Processing, pp. 298–307 (2015) Schnabel, T., Labutov, I., Mimno, D., Joachims, T.: Evaluation methods for unsupervised word embeddings. In: Proceedings of the 2015 Conference on Empirical Methods in Natural Language Processing, pp. 298–307 (2015)
28.
Zurück zum Zitat Nayak, N., Angeli, G., Manning, C.D.: Evaluating word embeddings using a representative suite of practical tasks. In: Proceedings of the 1st Workshop on Evaluating Vector-Space Representations for NLP, pp. 19–23 (2016) Nayak, N., Angeli, G., Manning, C.D.: Evaluating word embeddings using a representative suite of practical tasks. In: Proceedings of the 1st Workshop on Evaluating Vector-Space Representations for NLP, pp. 19–23 (2016)
29.
Zurück zum Zitat Mikolov, T., Chen, K., Corrado, G., Dean, J.: Efficient estimation of word representations in vector space. arXiv preprint arXiv:1301.3781 Mikolov, T., Chen, K., Corrado, G., Dean, J.: Efficient estimation of word representations in vector space. arXiv preprint arXiv:​1301.​3781
30.
Zurück zum Zitat Finkelstein, L., et al.: Placing search in context: the concept revisited. In: Proceedings of the 10th International Conference on World Wide Web. ACM, pp. 406–414 (2001) Finkelstein, L., et al.: Placing search in context: the concept revisited. In: Proceedings of the 10th International Conference on World Wide Web. ACM, pp. 406–414 (2001)
31.
Zurück zum Zitat van der Maaten, L., Hinton, G.: Visualizing data using t-SNE. J. Mach. Learn. Res. 9(Nov), 2579–2605 (2008)MATH van der Maaten, L., Hinton, G.: Visualizing data using t-SNE. J. Mach. Learn. Res. 9(Nov), 2579–2605 (2008)MATH
32.
Zurück zum Zitat Wen, X., et al.: Terms selecting study of revision of traditional chinese medical subject headings thesaurus, based on terms frequency statistics of subject headings indexes and keywords.”. Chin. J. Inf. Tradit. Chin. Med. 10, 16–18 (2013) Wen, X., et al.: Terms selecting study of revision of traditional chinese medical subject headings thesaurus, based on terms frequency statistics of subject headings indexes and keywords.”. Chin. J. Inf. Tradit. Chin. Med. 10, 16–18 (2013)
Metadaten
Titel
Semantic Representations of Terms in Traditional Chinese Medicine
verfasst von
Qinan Hu
Ling Zhu
Feng Yang
Jinghua Li
Qi Yu
Ye Tian
Tong Yu
Yueguo Gu
Copyright-Jahr
2020
DOI
https://doi.org/10.1007/978-3-030-38189-9_77