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2022 | OriginalPaper | Buchkapitel

14. Wastewater-Based Epidemiology (WBE) Studies for Monitoring of Covid-19 Spread

verfasst von : Bilge Alpaslan Kocamemi, Halil Kurt, Esra Erken, Ahmet Mete Saatçi

Erschienen in: Water and Wastewater Management

Verlag: Springer International Publishing

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Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) started in Wuhan, China, in December 2019 and was announced as a worldwide pandemic spread by WHO on March 11, 2020. The countries have started to monitor surveillance of SARS-CoV-2 through medical tests. However, people with no or very light symptoms are usually not medically tested or never hospitalized, and their test results missed. In March 2020, it was recognized that the urine and feces of all infected people contain SARS-CoV-2. After that, wastewater-based epidemiology studies have gained significant importance around the world. This chapter aims to describe the basics of wastewater-based epidemiology (WBE) studies, the current situation in the world together with the post-Covid-19 approaches. Additionally, the major challenges in Covid-19 WBE studies are discussed.

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Literatur
2.
Zurück zum Zitat Jones DL, Baluja MQ, Graham DW, Corbishley A, McDonald JE, Malham SK, Hillary LS, Connor TR, Gaze WH, Moura IB, Wilcox MH, Farkas K. Shedding of SARS-CoV-2 in feces and urine and its potential role in person-to-person transmission and the environment-based spread of COVID-19. Sci Total Environ. 2020;749. https://doi.org/10.1016/j.scitotenv.2020.141364. Jones DL, Baluja MQ, Graham DW, Corbishley A, McDonald JE, Malham SK, Hillary LS, Connor TR, Gaze WH, Moura IB, Wilcox MH, Farkas K. Shedding of SARS-CoV-2 in feces and urine and its potential role in person-to-person transmission and the environment-based spread of COVID-19. Sci Total Environ. 2020;749. https://​doi.​org/​10.​1016/​j.​scitotenv.​2020.​141364.
3.
Zurück zum Zitat van Doorn AS, Meijer B, Frampton CM, Barclay ML, de Boer NK. Systematic review with meta‐analysis: SARS‐CoV‐2 stool testing and the potential for faecal‐oral transmission. Aliment Pharmacol Ther. 2020. van Doorn AS, Meijer B, Frampton CM, Barclay ML, de Boer NK. Systematic review with meta‐analysis: SARS‐CoV‐2 stool testing and the potential for faecal‐oral transmission. Aliment Pharmacol Ther. 2020.
4.
Zurück zum Zitat Jiang X, Luo M, Zou Z, Wang X, Chen C, Qiu J. Asymptomatic SARS-CoV-2 infected case with viral detection positive in stool but negative in nasopharyngeal samples lasts for 42 days. J Med Virol. 2020;92(10):1807–9. https://doi.org/10.1002/jmv.25941. Jiang X, Luo M, Zou Z, Wang X, Chen C, Qiu J. Asymptomatic SARS-CoV-2 infected case with viral detection positive in stool but negative in nasopharyngeal samples lasts for 42 days. J Med Virol. 2020;92(10):1807–9. https://​doi.​org/​10.​1002/​jmv.​25941.
5.
Zurück zum Zitat Wölfel R, Corman VM, Guggemos W, Seilmaier M, Zange S, Mueller MA, Niemeyer D, Vollmar P, Rothe C, Hoelscher M, Bleicker T, Bruenink S, Schneider J, Ehmann R, Zwirglmaier K, Drosten C, Wendtner C. Virological assessment of hospitalized cases of coronavirus disease 2019. Nature. 2020. https://doi.org/10.1038/s41586-020-2196-x.CrossRef Wölfel R, Corman VM, Guggemos W, Seilmaier M, Zange S, Mueller MA, Niemeyer D, Vollmar P, Rothe C, Hoelscher M, Bleicker T, Bruenink S, Schneider J, Ehmann R, Zwirglmaier K, Drosten C, Wendtner C. Virological assessment of hospitalized cases of coronavirus disease 2019. Nature. 2020. https://​doi.​org/​10.​1038/​s41586-020-2196-x.CrossRef
10.
Zurück zum Zitat Ling Y, Xu SB, Lin YX, Tian D, Zhu ZQ, Dai FH, Wu F, Song Gang Z, Huang W, Chen J, Hu BJ, Wang S, Mao EQ, Zhu L, Zhang WH, Lu HZ. Persistence and clearance of viral RNA in 2019 novel coronavirus disease rehabilitation patients. Chin Med J. 2020;133(9):1039–1043. Ling Y, Xu SB, Lin YX, Tian D, Zhu ZQ, Dai FH, Wu F, Song Gang Z, Huang W, Chen J, Hu BJ, Wang S, Mao EQ, Zhu L, Zhang WH, Lu HZ. Persistence and clearance of viral RNA in 2019 novel coronavirus disease rehabilitation patients. Chin Med J. 2020;133(9):1039–1043.
13.
Zurück zum Zitat Medema G, Heijnen L, Elsinga G, Italiaander R, Brouwer A. Presence of SARS-Coronavirus-2 in sewage. medRxiv: 2020.2003.2029.20045880; 2020. Medema G, Heijnen L, Elsinga G, Italiaander R, Brouwer A. Presence of SARS-Coronavirus-2 in sewage. medRxiv: 2020.2003.2029.20045880; 2020.
17.
Zurück zum Zitat Green H, Wilder M, Middleton FA, Collins M, Fenty A, Gentile K, Kmush B, Zeng T, Larsen DA. Quantification of SARS-CoV-2 and cross-assembly phage (crAssphage) from wastewater to monitor coronavirus transmission within communities. 2020. https://doi.org/10.1101/2020.05.21.20109181. Green H, Wilder M, Middleton FA, Collins M, Fenty A, Gentile K, Kmush B, Zeng T, Larsen DA. Quantification of SARS-CoV-2 and cross-assembly phage (crAssphage) from wastewater to monitor coronavirus transmission within communities. 2020. https://​doi.​org/​10.​1101/​2020.​05.​21.​20109181.
18.
Zurück zum Zitat Wu F, Xiao A, Zhang J, Moniz K, Endo N, Armas F, Bonneau R, Brown MA, Bushman M, Chai PR, Duvallet C, Erickson TB, Foppe K, Ghaeli N, Gu X, Hanage WP, Huang KH, Lee WL, Matus M, McElroy KA, Nagler J, Rhode SF, Santillana M, Tucker JA, Wuertz S, Zhao S, Thompson J, Alm EJ. SARS-CoV-2 titers in wastewater foreshadow dynamics and clinical presentation of new COVID-19 cases. 2020. https://doi.org/10.1101/2020.06.15.20117747. Wu F, Xiao A, Zhang J, Moniz K, Endo N, Armas F, Bonneau R, Brown MA, Bushman M, Chai PR, Duvallet C, Erickson TB, Foppe K, Ghaeli N, Gu X, Hanage WP, Huang KH, Lee WL, Matus M, McElroy KA, Nagler J, Rhode SF, Santillana M, Tucker JA, Wuertz S, Zhao S, Thompson J, Alm EJ. SARS-CoV-2 titers in wastewater foreshadow dynamics and clinical presentation of new COVID-19 cases. 2020. https://​doi.​org/​10.​1101/​2020.​06.​15.​20117747.
20.
22.
Zurück zum Zitat Ahmed W, Angel N, Edson J, Bibby K, Bivins A, O’Brien JW, Choi PM, Kitajima M, Simpson SL, Li J, Tscharke B, Verhagen R, Smith WJM, Zaugg J, Dierens L, Hugenholtz P, Thomas KV, Mueller JF. First confirmed detection of SARS-CoV-2 in untreated wastewater in Australia: a proof of concept for the wastewater surveillance of COVID-19 in the community. Sci Total Environ. 2020;138764. https://doi.org/10.1016/J.SCITOTENV.2020.138764. Ahmed W, Angel N, Edson J, Bibby K, Bivins A, O’Brien JW, Choi PM, Kitajima M, Simpson SL, Li J, Tscharke B, Verhagen R, Smith WJM, Zaugg J, Dierens L, Hugenholtz P, Thomas KV, Mueller JF. First confirmed detection of SARS-CoV-2 in untreated wastewater in Australia: a proof of concept for the wastewater surveillance of COVID-19 in the community. Sci Total Environ. 2020;138764. https://​doi.​org/​10.​1016/​J.​SCITOTENV.​2020.​138764.
31.
Zurück zum Zitat Vallejo JA, Feal SR, Perez KC, Oriona AL, Tarrio J, Reif R, Ladra S, Janeiro BKR, Nasser M, Cid A, Veiga MC, Acevedo A, Lamora C, Bou G, Cao R, Poza M. Highly predictive regression model of active cases of COVID-19 in a population by screening wastewater viral load. 2020. https://doi.org/10.1101/2020.07.02.20144865. Vallejo JA, Feal SR, Perez KC, Oriona AL, Tarrio J, Reif R, Ladra S, Janeiro BKR, Nasser M, Cid A, Veiga MC, Acevedo A, Lamora C, Bou G, Cao R, Poza M. Highly predictive regression model of active cases of COVID-19 in a population by screening wastewater viral load. 2020. https://​doi.​org/​10.​1101/​2020.​07.​02.​20144865.
33.
Zurück zum Zitat Rimoldi SG, Stefani F, Gigantiello A, Polesello S, Comandatore F, Mileto D, Maresca M, Longobardi C, Mancon A, Romeri F, Pagani C, Moja L, Gismondo MR, Salerno F. Presence and vitality of SARS-CoV-2 virus in wastewaters and rivers. 2020. https://doi.org/10.1101/2020.05.01.20086009. Rimoldi SG, Stefani F, Gigantiello A, Polesello S, Comandatore F, Mileto D, Maresca M, Longobardi C, Mancon A, Romeri F, Pagani C, Moja L, Gismondo MR, Salerno F. Presence and vitality of SARS-CoV-2 virus in wastewaters and rivers. 2020. https://​doi.​org/​10.​1101/​2020.​05.​01.​20086009.
35.
Zurück zum Zitat Or IB, Yaniv K, Shagan M, Ozer E, Erster O, Mendelson E, Mannasse B, Shirazi R, Winter EK, Nir O, Ali HA, Ronen Z, Rinott E, Lewis YE, Friedler EF, Paitan Y, Bitkover E, Berchenko Y, KushmaroA. Regressing SARS-CoV-2 sewage measurements onto COVID-19 burden in the population: a proof-of-concept for quantitative environmental surveillance. 2020. medRxiv 2020.04.26.20073569. https://doi.org/10.1101/2020.04.26.20073569. Or IB, Yaniv K, Shagan M, Ozer E, Erster O, Mendelson E, Mannasse B, Shirazi R, Winter EK, Nir O, Ali HA, Ronen Z, Rinott E, Lewis YE, Friedler EF, Paitan Y, Bitkover E, Berchenko Y, KushmaroA. Regressing SARS-CoV-2 sewage measurements onto COVID-19 burden in the population: a proof-of-concept for quantitative environmental surveillance. 2020. medRxiv 2020.04.26.20073569. https://​doi.​org/​10.​1101/​2020.​04.​26.​20073569.
37.
Zurück zum Zitat Alpaslan Kocamemi B, Kurt H, Sait A, Sarac F, Saatci AM, Pakdemirli B. SARS-CoV-2 detection in Istanbul wastewater treatment plant sludges. 2020. medRxiv. 2020.2005.2012.20099358. Alpaslan Kocamemi B, Kurt H, Sait A, Sarac F, Saatci AM, Pakdemirli B. SARS-CoV-2 detection in Istanbul wastewater treatment plant sludges. 2020. medRxiv. 2020.2005.2012.20099358.
40.
45.
Zurück zum Zitat Sharif S, Ikram A, Khurshid A, Salman M, Mehmood N, Arshad Y, Ahmad J, Angez M, Alam MM, Rehman L, Mujtaba G, Hussain J, Ali J, Akthar R, Malik MW, Baig ZI, Rana MS, Usman M, Ali MQ, Ahad A, Badar N, Umair M, Tamim S, Ashraf A, Tahir F, Ali N. Detection of SARS-Coronavirus-2 in wastewater, using the existing environmental surveillance network: an epidemiological gateway to an early warning for COVID-19 in communities. 2020. https://doi.org/10.1101/2020.06.03.20121426. Sharif S, Ikram A, Khurshid A, Salman M, Mehmood N, Arshad Y, Ahmad J, Angez M, Alam MM, Rehman L, Mujtaba G, Hussain J, Ali J, Akthar R, Malik MW, Baig ZI, Rana MS, Usman M, Ali MQ, Ahad A, Badar N, Umair M, Tamim S, Ashraf A, Tahir F, Ali N. Detection of SARS-Coronavirus-2 in wastewater, using the existing environmental surveillance network: an epidemiological gateway to an early warning for COVID-19 in communities. 2020. https://​doi.​org/​10.​1101/​2020.​06.​03.​20121426.
46.
Zurück zum Zitat Fongaro G, Stoco PH, Souza DSM, Grisard EC, Magri ME, Rogovski P, Schorner MA, Barazzetti FH, Christoff AP, Valter de Oliveira LP, Bazzo ML, Wagner G, Hernandez M, Lazaro DR. SARS-CoV-2 in human sewage in Santa Catalina, Brazil, November 2019. 2020. https://doi.org/10.1101/2020.06.26.20140731. Fongaro G, Stoco PH, Souza DSM, Grisard EC, Magri ME, Rogovski P, Schorner MA, Barazzetti FH, Christoff AP, Valter de Oliveira LP, Bazzo ML, Wagner G, Hernandez M, Lazaro DR. SARS-CoV-2 in human sewage in Santa Catalina, Brazil, November 2019. 2020. https://​doi.​org/​10.​1101/​2020.​06.​26.​20140731.
47.
Zurück zum Zitat Prado T, Fumian TM, Mannarino CF, Maranhão AG, Siqueira MM, Miagostovich MP. Preliminary results of SARS-CoV-2 detection in sewerage system in Niterói municipality. Rio de Janeiro, Brazil. Memórias do Instituto Oswaldo Cruz, 115, e200196. 2020. Epub July 27. Prado T, Fumian TM, Mannarino CF, Maranhão AG, Siqueira MM, Miagostovich MP. Preliminary results of SARS-CoV-2 detection in sewerage system in Niterói municipality. Rio de Janeiro, Brazil. Memórias do Instituto Oswaldo Cruz, 115, e200196. 2020. Epub July 27.
53.
Zurück zum Zitat Ahmed F, Islam A, Kumar M, Hossain M, Bhattacharya P, Islam T, Hossen F, Hossain S, Islam S, Uddin M, Islam N, Bahadur NM, Alam D, Reza HM, Jakariya M. First detection of SARS-CoV-2 genetic material in the vicinity of COVID-19 isolation centre through wastewater surveillance in Bangladesh. 2020. https://doi.org/10.1101/2020.09.14.20194696. Ahmed F, Islam A, Kumar M, Hossain M, Bhattacharya P, Islam T, Hossen F, Hossain S, Islam S, Uddin M, Islam N, Bahadur NM, Alam D, Reza HM, Jakariya M. First detection of SARS-CoV-2 genetic material in the vicinity of COVID-19 isolation centre through wastewater surveillance in Bangladesh. 2020. https://​doi.​org/​10.​1101/​2020.​09.​14.​20194696.
54.
Zurück zum Zitat Betancourt WQ, Schmitz BW, Innes GK, Prasek SM, Pogreba Brown KM, Stark ER, Foster AR, Sprissler RS, Harris DT, Sherchan SP, Gerba CP, Pepper IL. COVID-19 containment on a college campus via wastewater-based epidemiology, targeted clinical testing, and an intervention. Sci Total Environ. 2021;779:146408. Betancourt WQ, Schmitz BW, Innes GK, Prasek SM, Pogreba Brown KM, Stark ER, Foster AR, Sprissler RS, Harris DT, Sherchan SP, Gerba CP, Pepper IL. COVID-19 containment on a college campus via wastewater-based epidemiology, targeted clinical testing, and an intervention. Sci Total Environ. 2021;779:146408.
55.
Zurück zum Zitat Colosi LM, Barry KE, Kotay SM, Porter MD, Poulter MD, Ratliff C, Simmons W, Steinberg LI, Wilson DD, Morse R, Zmick P, Mathers AJ. Development of wastewater pooled surveillance of SARS-CoV-2 from congregate living settings. 2020. medRxiv: 2020.2010.2010.20210484. Colosi LM, Barry KE, Kotay SM, Porter MD, Poulter MD, Ratliff C, Simmons W, Steinberg LI, Wilson DD, Morse R, Zmick P, Mathers AJ. Development of wastewater pooled surveillance of SARS-CoV-2 from congregate living settings. 2020. medRxiv: 2020.2010.2010.20210484.
56.
Zurück zum Zitat Gantzer C, Senouci S, Maul A, Levi Y, Schwartzbrod L. Enterovirus genomes in wastewater: concentration on glass wool and glass powder and detection by RT-PCR. J Virol Methods. 1997;65(2):265–71.CrossRef Gantzer C, Senouci S, Maul A, Levi Y, Schwartzbrod L. Enterovirus genomes in wastewater: concentration on glass wool and glass powder and detection by RT-PCR. J Virol Methods. 1997;65(2):265–71.CrossRef
57.
Zurück zum Zitat Parashar UD, Nelson EA, Kang G. Diagnosis, management, and prevention of rotavirus gastroenteritis in children. Br Med J. (Clinical Research Ed.). 2013;347:f7204. Parashar UD, Nelson EA, Kang G. Diagnosis, management, and prevention of rotavirus gastroenteritis in children. Br Med J. (Clinical Research Ed.). 2013;347:f7204.
58.
Zurück zum Zitat Girard M, Hirth L. Virologie moleculaire Doin Cd. Paris. Appl Enriron Microbial. 1989;53. Girard M, Hirth L. Virologie moleculaire Doin Cd. Paris. Appl Enriron Microbial. 1989;53.
59.
Zurück zum Zitat Havelaar AH. Bacteriophages as model viruses in water quality control.Water Res (Oxford). 1991;25(5):529–541. Havelaar AH. Bacteriophages as model viruses in water quality control.Water Res (Oxford). 1991;25(5):529–541.
60.
Zurück zum Zitat Grabow WOK, Neubrech TE, Holtzhausen CS, Jofre J. Bacteroides fragilis and Escherichia coli bacteriophages: excretion by humans and animals. Water Sci Technol. 1995;31(5–6):223–30.CrossRef Grabow WOK, Neubrech TE, Holtzhausen CS, Jofre J. Bacteroides fragilis and Escherichia coli bacteriophages: excretion by humans and animals. Water Sci Technol. 1995;31(5–6):223–30.CrossRef
61.
Zurück zum Zitat Havelaar AH, Furuse K, Hogeboom WM. Bacteriophages and indicator bacteria in human and animal faeces. J Appl Microbiol. 1986;60(3):255–62. Havelaar AH, Furuse K, Hogeboom WM. Bacteriophages and indicator bacteria in human and animal faeces. J Appl Microbiol. 1986;60(3):255–62.
62.
Zurück zum Zitat Havelaar AH, Pot-Hogeboom WM, Furuse K, Pot R, Hormann MP. F-specific RNA bacteriophages and sensitive host strains in faeces and wastewater of human and animal origin. J Appl Microbiol. 1990;69(1):30–7. Havelaar AH, Pot-Hogeboom WM, Furuse K, Pot R, Hormann MP. F-specific RNA bacteriophages and sensitive host strains in faeces and wastewater of human and animal origin. J Appl Microbiol. 1990;69(1):30–7.
63.
Zurück zum Zitat Joffre J. Les bacteriophages dans les milieux hydriques. In: Schwartzbrod L(ed.) Virologie des milieux hydriques. Tee Dot-Lavoisier, Paris; 1991. pp. 253–274. Joffre J. Les bacteriophages dans les milieux hydriques. In: Schwartzbrod L(ed.) Virologie des milieux hydriques. Tee Dot-Lavoisier, Paris; 1991. pp. 253–274.
64.
Zurück zum Zitat Masters PS, Perlman S. Coronaviridae. In: Knipe DM, Howley PM (eds) Fields virology, 6th edn, vol 2; 2013. pp. 825–858. Masters PS, Perlman S. Coronaviridae. In: Knipe DM, Howley PM (eds) Fields virology, 6th edn, vol 2; 2013. pp. 825–858.
65.
Zurück zum Zitat Zhong NS, Zheng BJ, Li YM, Poon Xie ZH, Chan KH, Li PH, Tan SY, Chang Q, Xie JP, Liu XQ, Xu J, Li DX, Yuen KY, Peiris, Guan Y. Epidemiology and cause of severe acute respiratory syndrome (SARS) in Guangdong, People’s Republic of China, in February 2003. Lancet (London, England). 2003;362(9393):1353–1358. https://doi.org/10.1016/s0140-6736(03)14630-2.b Zhong NS, Zheng BJ, Li YM, Poon Xie ZH, Chan KH, Li PH, Tan SY, Chang Q, Xie JP, Liu XQ, Xu J, Li DX, Yuen KY, Peiris, Guan Y. Epidemiology and cause of severe acute respiratory syndrome (SARS) in Guangdong, People’s Republic of China, in February 2003. Lancet (London, England). 2003;362(9393):1353–1358. https://​doi.​org/​10.​1016/​s0140-6736(03)14630-2.b
66.
Zurück zum Zitat Zaki AM, van Boheemen S, Bestebroer TM, Osterhaus ADME, Fouchier RAM. Isolation of a novel coronavirus from a man with pneumonia in Saudi Arabia. N Engl J Med. 2012;367(19):1814–20.CrossRef Zaki AM, van Boheemen S, Bestebroer TM, Osterhaus ADME, Fouchier RAM. Isolation of a novel coronavirus from a man with pneumonia in Saudi Arabia. N Engl J Med. 2012;367(19):1814–20.CrossRef
68.
Zurück zum Zitat Jiang S, Hillyer C, Du L. Neutralizing antibodies against SARS-CoV-2 and other human Coronaviruses. Trends Immunol. 2020. Jiang S, Hillyer C, Du L. Neutralizing antibodies against SARS-CoV-2 and other human Coronaviruses. Trends Immunol. 2020.
69.
Zurück zum Zitat Song Z, Xu Y, Bao L, Zhang L, Yu P, Qu Y, Zhu H, Zhao W, Han Y, Qin C. From SARS to MERS, thrusting coronaviruses into the spotlight. Viruses. 2019;11(1):59. Song Z, Xu Y, Bao L, Zhang L, Yu P, Qu Y, Zhu H, Zhao W, Han Y, Qin C. From SARS to MERS, thrusting coronaviruses into the spotlight. Viruses. 2019;11(1):59.
71.
Zurück zum Zitat Mercer TR, Salit M. Testing at scale during the COVID-19 pandemic. Nat Rev Genet. 2021;22:415–26.CrossRef Mercer TR, Salit M. Testing at scale during the COVID-19 pandemic. Nat Rev Genet. 2021;22:415–26.CrossRef
72.
Zurück zum Zitat Surkova E, Nikolayevskyy V, Drobniewski F. False-positive COVID-19 results: hidden problems and costs. The Lancet. 2020;8(12):1167–8. Surkova E, Nikolayevskyy V, Drobniewski F. False-positive COVID-19 results: hidden problems and costs. The Lancet. 2020;8(12):1167–8.
73.
Zurück zum Zitat Medema G, Been F, Heijnen L, Petterson S. Implementation of environmental surveillance for SARS-CoV-2 virus to support public health decisions: Opportunities and challenges. Curr Opin Environ Sci Health. 2020;17:49–71.CrossRef Medema G, Been F, Heijnen L, Petterson S. Implementation of environmental surveillance for SARS-CoV-2 virus to support public health decisions: Opportunities and challenges. Curr Opin Environ Sci Health. 2020;17:49–71.CrossRef
74.
Zurück zum Zitat Orive G, Lertxundi U, Barcelo D. Early SARS-CoV-2 outbreak detection by sewage-based epidemiology. Sci Total Environ. 2020;732:139298. Orive G, Lertxundi U, Barcelo D. Early SARS-CoV-2 outbreak detection by sewage-based epidemiology. Sci Total Environ. 2020;732:139298.
75.
Zurück zum Zitat Bivins A, North D, Ahmad A, Ahmed W, Alm E, Been F, Bhattacharya P, Bijlsma L, Boehm AB, Brown J, Buttiglieri G, Calabro V, Carducci A, Castiglioni S, Gurol ZC, Chakraborty S, Costa F, Curcio S, Reyes FL, Vela JD, Farkas K, Fernandez-Casi X, Gerba C, Gerrity D, Girones R, Gonzalez R, Haramoto E, Harris A, Holden PA, Islam MdT, Jones DL, Kasprzyk-Hordern B, Kitajima M, Kotlarz N, Kumar M, Kuroda K, Rosa G, Malpei F, Mautus M, McLellan SL, Medema G, Meschke JS, Mueller J, Newton RJ, Nilsson D, Noble RT, van Nuijs A, Peccia J, Perkins TA, Pickering AJ, Rose J, Sanchez G, Smith A, Stadler L, Stauber C, Thomas K, van der Voorn T, Wigginton K, Zhu K, Bibby K. Wastewater-based epidemiology: global collaborative to maximize contributions in the fight against COVID-19. 2020;54(13):7754–7757. Bivins A, North D, Ahmad A, Ahmed W, Alm E, Been F, Bhattacharya P, Bijlsma L, Boehm AB, Brown J, Buttiglieri G, Calabro V, Carducci A, Castiglioni S, Gurol ZC, Chakraborty S, Costa F, Curcio S, Reyes FL, Vela JD, Farkas K, Fernandez-Casi X, Gerba C, Gerrity D, Girones R, Gonzalez R, Haramoto E, Harris A, Holden PA, Islam MdT, Jones DL, Kasprzyk-Hordern B, Kitajima M, Kotlarz N, Kumar M, Kuroda K, Rosa G, Malpei F, Mautus M, McLellan SL, Medema G, Meschke JS, Mueller J, Newton RJ, Nilsson D, Noble RT, van Nuijs A, Peccia J, Perkins TA, Pickering AJ, Rose J, Sanchez G, Smith A, Stadler L, Stauber C, Thomas K, van der Voorn T, Wigginton K, Zhu K, Bibby K. Wastewater-based epidemiology: global collaborative to maximize contributions in the fight against COVID-19. 2020;54(13):7754–7757.
76.
Zurück zum Zitat Lorenzo M, Pico Y. Wastewater-based epidemiology: current status and future prospects. Curr Opin Environ Sci Health. 2019;9:77–84.CrossRef Lorenzo M, Pico Y. Wastewater-based epidemiology: current status and future prospects. Curr Opin Environ Sci Health. 2019;9:77–84.CrossRef
77.
Zurück zum Zitat Asghar OM, Diop G, Weldegebriel F, Malik S, Shetty L, El Bassioni, Akande AO, Al Maamoun E, Zaidi S, Adeniji AJ, Burns CC, Deshpande J, Oberste MS, Lowther SA. Environmental surveillance for polioviruses in the global polio eradication initiative. J Infect Dis. 210:294–303. Asghar OM, Diop G, Weldegebriel F, Malik S, Shetty L, El Bassioni, Akande AO, Al Maamoun E, Zaidi S, Adeniji AJ, Burns CC, Deshpande J, Oberste MS, Lowther SA. Environmental surveillance for polioviruses in the global polio eradication initiative. J Infect Dis. 210:294–303.
78.
Zurück zum Zitat Liu P, Ibaraki M, VanTassell J, Geith K, Cavallo M, Kann R, Moe C. A novel COVID-19 early warning tool: Moore Swab method for wastewater surveillance at an institutional level. Prepr Server Health Sci. 2020. Liu P, Ibaraki M, VanTassell J, Geith K, Cavallo M, Kann R, Moe C. A novel COVID-19 early warning tool: Moore Swab method for wastewater surveillance at an institutional level. Prepr Server Health Sci. 2020.
79.
Zurück zum Zitat Gao Z, Xu Y, Sun C, Wang X, Guo Y, Qui S, Ma K. A systematic review of asymptomatic infections with COVID-19. J Microbiol Immunol Infect. 2021;54(1):12–6.CrossRef Gao Z, Xu Y, Sun C, Wang X, Guo Y, Qui S, Ma K. A systematic review of asymptomatic infections with COVID-19. J Microbiol Immunol Infect. 2021;54(1):12–6.CrossRef
80.
Zurück zum Zitat Peirlinck M, Linka K, Costabal FS, Bhattacharya J, Bandavid E, Ioannidis JPA, Kuhl E. Visualizing the invisible: the effect of asymptomatic transmission on the outbreak dynamics of COVID-19. Comput Methods Appl Mech Eng. 2020;372(1):113410. Peirlinck M, Linka K, Costabal FS, Bhattacharya J, Bandavid E, Ioannidis JPA, Kuhl E. Visualizing the invisible: the effect of asymptomatic transmission on the outbreak dynamics of COVID-19. Comput Methods Appl Mech Eng. 2020;372(1):113410.
81.
Zurück zum Zitat Daughton CG. Wastewater surveillance for population-wide Covid-19: the present and future. Sci Total Environ. 2020;736:139631. Daughton CG. Wastewater surveillance for population-wide Covid-19: the present and future. Sci Total Environ. 2020;736:139631.
82.
Zurück zum Zitat Knoll RL, Klopp J, Bonewitz G, Gröndahl B, Hilbert K, Kohnen W, Weise K, Plachter B, Hitzler W, Kowalzik F, Runkel S, Zepp F, Winter J, Cacicedo ML, Gehring S. Containment of a large SARS-CoV-2 outbreak among healthcare workers in a pediatric intensive care unit. Pediatr Infect Dis J. 2020;39(11):336–339. Knoll RL, Klopp J, Bonewitz G, Gröndahl B, Hilbert K, Kohnen W, Weise K, Plachter B, Hitzler W, Kowalzik F, Runkel S, Zepp F, Winter J, Cacicedo ML, Gehring S. Containment of a large SARS-CoV-2 outbreak among healthcare workers in a pediatric intensive care unit. Pediatr Infect Dis J. 2020;39(11):336–339.
83.
Zurück zum Zitat Wee LE, Sim XYJ, Conceicao EP, Aung MK, Goh JQ, Yeo DWT, Gan WH, Chua YY, Wijaya L, Tan TT, Tan BH, Ling ML, Venkatachalam I. Containment of COVID-19 cases among healthcare workers: the role of surveillance, early detection, and outbreak management. Infect Control Hosp Epidemiol. 2020;41(7):765–71. Wee LE, Sim XYJ, Conceicao EP, Aung MK, Goh JQ, Yeo DWT, Gan WH, Chua YY, Wijaya L, Tan TT, Tan BH, Ling ML, Venkatachalam I. Containment of COVID-19 cases among healthcare workers: the role of surveillance, early detection, and outbreak management. Infect Control Hosp Epidemiol. 2020;41(7):765–71.
84.
Zurück zum Zitat Peccia J, Zulli A, Brackney DE, Grubaugh ND, Kaplan EH, Massana AC, Ko AI, Malik AA, Wang D, Wang M, Warren JL, Weinberger DM, Omer SB. SARS-CoV-2 RNA concentrations in primary municipal sewage sludge as a leading indicator of COVID-19 outbreak dynamics. 2020. https://doi.org/10.1101/2020.05.19.20105999. Peccia J, Zulli A, Brackney DE, Grubaugh ND, Kaplan EH, Massana AC, Ko AI, Malik AA, Wang D, Wang M, Warren JL, Weinberger DM, Omer SB. SARS-CoV-2 RNA concentrations in primary municipal sewage sludge as a leading indicator of COVID-19 outbreak dynamics. 2020. https://​doi.​org/​10.​1101/​2020.​05.​19.​20105999.
85.
Zurück zum Zitat Balboa S, Iglesias MM, Rodríguez S, Lamas LM, Vasallo FJ, Regueiro B, Lema JL. The fate of SARS-CoV-2 in wastewater treatment plants points out the sludge line as a suitable spot for incidence monitoring. 2020. Balboa S, Iglesias MM, Rodríguez S, Lamas LM, Vasallo FJ, Regueiro B, Lema JL. The fate of SARS-CoV-2 in wastewater treatment plants points out the sludge line as a suitable spot for incidence monitoring. 2020.
86.
Zurück zum Zitat Tiwari SB, Gahlot P, Tyagi VK, Zhang L, Zhou Y, Kazmi AA, Kumar M. Surveillance of wastewater for early epidemic prediction (SWEEP): environmental and health security perspectives in the post COVID-19 anthropocene. Environ Res. 2021;195:110831. Tiwari SB, Gahlot P, Tyagi VK, Zhang L, Zhou Y, Kazmi AA, Kumar M. Surveillance of wastewater for early epidemic prediction (SWEEP): environmental and health security perspectives in the post COVID-19 anthropocene. Environ Res. 2021;195:110831.
87.
Zurück zum Zitat Zhang D, Ling H, Huang X, Li J, Li W, Yi C, Zhang T, Jiang Y, He Y, Deng S, Zhang X, Wang X, Liu Y, Li G, Qu J. Potential spreading risks and disinfection challenges of medical wastewater by the presence of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) viral RNA in septic tanks of Fangcang Hospital. Sci Total Environ. 2020;741:140445. Zhang D, Ling H, Huang X, Li J, Li W, Yi C, Zhang T, Jiang Y, He Y, Deng S, Zhang X, Wang X, Liu Y, Li G, Qu J. Potential spreading risks and disinfection challenges of medical wastewater by the presence of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) viral RNA in septic tanks of Fangcang Hospital. Sci Total Environ. 2020;741:140445.
88.
Zurück zum Zitat Haramoto E, Kitajima M, Hata A, Torrey JR, Masago Y, Sano D, Katayama H. A review on recent progress in the detection methods and prevalence of human enteric viruses in water. Water Res. 2018;135:168–86.CrossRef Haramoto E, Kitajima M, Hata A, Torrey JR, Masago Y, Sano D, Katayama H. A review on recent progress in the detection methods and prevalence of human enteric viruses in water. Water Res. 2018;135:168–86.CrossRef
89.
Zurück zum Zitat Wu D, Koganti R, Lambe UP, Yadavalli T, Nandi SS, Shukla D. Vaccines and therapies in development for SARS-CoV-2 infections. J Clin Med. 2020;9(6):1885.CrossRef Wu D, Koganti R, Lambe UP, Yadavalli T, Nandi SS, Shukla D. Vaccines and therapies in development for SARS-CoV-2 infections. J Clin Med. 2020;9(6):1885.CrossRef
90.
Zurück zum Zitat Randazzo W, Truchado P, Cuevas-Ferrando E, Simón P, Allende A, Sánchez G. SARS-CoV-2 RNA in wastewater anticipated COVID-19 occurrence in a low prevalence area. Water Res. 2020;181:115942. Randazzo W, Truchado P, Cuevas-Ferrando E, Simón P, Allende A, Sánchez G. SARS-CoV-2 RNA in wastewater anticipated COVID-19 occurrence in a low prevalence area. Water Res. 2020;181:115942.
92.
Zurück zum Zitat LaTurner ZW, Zong DM, Kalvapalle P, Gamas KR, Terwilliger A, Crosby T, Ali P et al. Evaluating recovery, cost, and throughput of different concentration methods for SARS-CoV-2 wastewater-based epidemiology. Water Res. 2021;197:117043. LaTurner ZW, Zong DM, Kalvapalle P, Gamas KR, Terwilliger A, Crosby T, Ali P et al. Evaluating recovery, cost, and throughput of different concentration methods for SARS-CoV-2 wastewater-based epidemiology. Water Res. 2021;197:117043.
93.
Zurück zum Zitat Barril PA, Pianciola LA, Mazzeo M, Ousset MJ, Jaureguiberry MV, Alessandrello M, Sánchez G, Oteiza JM. Evaluation of viral concentration methods for SARS-CoV-2 recovery from wastewaters. Sci Total Environ. 2021;756:144105. Barril PA, Pianciola LA, Mazzeo M, Ousset MJ, Jaureguiberry MV, Alessandrello M, Sánchez G, Oteiza JM. Evaluation of viral concentration methods for SARS-CoV-2 recovery from wastewaters. Sci Total Environ. 2021;756:144105.
94.
Zurück zum Zitat H10 Ahmed W, Bertsch P, Bivins A, Bibby K, Farkas K, Gathercole A, Haramoto E et al. Comparison of virus concentration methods for the RT-qPCR-based recovery of murine hepatitis virus, a surrogate for SARS-CoV-2 from untreated wastewater. Sci Total Environ. 2020;739:139960. H10 Ahmed W, Bertsch P, Bivins A, Bibby K, Farkas K, Gathercole A, Haramoto E et al. Comparison of virus concentration methods for the RT-qPCR-based recovery of murine hepatitis virus, a surrogate for SARS-CoV-2 from untreated wastewater. Sci Total Environ. 2020;739:139960.
95.
Zurück zum Zitat H11 Philo SE, Kemi EK, Swanstrom R, Ong A, Burnor EA, Kossik AL, Harrison JC et al. A comparison of SARS-CoV-2 wastewater concentration methods for environmental surveillance. Sci Total Environ. 2021;760:144215. H11 Philo SE, Kemi EK, Swanstrom R, Ong A, Burnor EA, Kossik AL, Harrison JC et al. A comparison of SARS-CoV-2 wastewater concentration methods for environmental surveillance. Sci Total Environ. 2021;760:144215.
96.
Zurück zum Zitat van Kasteren PB, van Der Veer B, van den Brink S, Wijsman L, de Jonge J, van den Brandt A, Molenkamp R, Reusken CBEM, Meijer A. Comparison of seven commercial RT-PCR diagnostic kits for COVID-19. J Clin Virol. 2020;128:104412. van Kasteren PB, van Der Veer B, van den Brink S, Wijsman L, de Jonge J, van den Brandt A, Molenkamp R, Reusken CBEM, Meijer A. Comparison of seven commercial RT-PCR diagnostic kits for COVID-19. J Clin Virol. 2020;128:104412.
97.
Zurück zum Zitat Jahn K, Dreifuss D, Topolsky I, Kull A, Ganesanandamoorthy P, Fernandez-Cassi X, Bänziger C et al. Detection of SARS-CoV-2 variants in Switzerland by genomic analysis of wastewater samples. medRxiv. 2021. Jahn K, Dreifuss D, Topolsky I, Kull A, Ganesanandamoorthy P, Fernandez-Cassi X, Bänziger C et al. Detection of SARS-CoV-2 variants in Switzerland by genomic analysis of wastewater samples. medRxiv. 2021.
98.
Zurück zum Zitat Landgraff C, Wang LYR, Buchanan C, Wells M, Schonfeld J, Bessonov K, Ali J, Robert E, Nadon C. Metagenomic sequencing of municipal wastewater provides a near-complete SARS-CoV-2 genome sequence identified as the B. 1.1. 7 variant of concern from a Canadian municipality concurrent with an outbreak. medRxiv. 2021. Landgraff C, Wang LYR, Buchanan C, Wells M, Schonfeld J, Bessonov K, Ali J, Robert E, Nadon C. Metagenomic sequencing of municipal wastewater provides a near-complete SARS-CoV-2 genome sequence identified as the B. 1.1. 7 variant of concern from a Canadian municipality concurrent with an outbreak. medRxiv. 2021.
99.
Zurück zum Zitat Wurtzer S, Waldman P, Levert M, Mouchel JM, Gorgé O, Boni M, Maday Y, Marechal V, Moulin L. Monitoring the propagation of SARS CoV2 variants by tracking identified mutation in wastewater using specific RT-qPCR. medRxiv. 2021. Wurtzer S, Waldman P, Levert M, Mouchel JM, Gorgé O, Boni M, Maday Y, Marechal V, Moulin L. Monitoring the propagation of SARS CoV2 variants by tracking identified mutation in wastewater using specific RT-qPCR. medRxiv. 2021.
100.
Zurück zum Zitat Lu D, Zhu DZ, Gan H, Yao Z, Fu Q, Zhang XJ. Prospects and challenges of using electrochemical immunosensors as an alternative detection method for SARS-CoV-2 wastewater-based epidemiology. Sci Total Environ. 2021:146239. Lu D, Zhu DZ, Gan H, Yao Z, Fu Q, Zhang XJ. Prospects and challenges of using electrochemical immunosensors as an alternative detection method for SARS-CoV-2 wastewater-based epidemiology. Sci Total Environ. 2021:146239.
101.
Zurück zum Zitat Eckerle LD, Becker MM, Halpin RA, Li K, Venter E, Lu X, Scherbakova S et al. Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing. PLoS Pathog. 2010;6(5):e1000896. Eckerle LD, Becker MM, Halpin RA, Li K, Venter E, Lu X, Scherbakova S et al. Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing. PLoS Pathog. 2010;6(5):e1000896.
102.
Zurück zum Zitat Dilucca M, Forcelloni S, Georgakilas AG, Giansanti A, Pavlopoulou A. Codon usage and phenotypic divergences of SARS-CoV-2 genes. Viruses. 2020;12(5):498.CrossRef Dilucca M, Forcelloni S, Georgakilas AG, Giansanti A, Pavlopoulou A. Codon usage and phenotypic divergences of SARS-CoV-2 genes. Viruses. 2020;12(5):498.CrossRef
103.
Zurück zum Zitat Hou YJ, Chiba S, Halfmann P, Ehre C, Kuroda M, Dinnon KH, Leist SR, Schäfer A, Nakajima N, Takahashi KJS. SARS-CoV-2 D614G variant exhibits efficient replication ex vivo and transmission in vivo. 2020;370(6523):1464–8. Hou YJ, Chiba S, Halfmann P, Ehre C, Kuroda M, Dinnon KH, Leist SR, Schäfer A, Nakajima N, Takahashi KJS. SARS-CoV-2 D614G variant exhibits efficient replication ex vivo and transmission in vivo. 2020;370(6523):1464–8.
104.
Zurück zum Zitat Korber B, Fischer WM, Gnanakaran S, Yoon H, Theiler J, Abfalterer W, Hengartner N, Giorgi EE, Bhattacharya T, Foley BJC. Tracking changes in SARS-CoV-2 Spike: evidence that D614G increases infectivity of the COVID-19 virus. 2020;182(4):812–27. e819. Korber B, Fischer WM, Gnanakaran S, Yoon H, Theiler J, Abfalterer W, Hengartner N, Giorgi EE, Bhattacharya T, Foley BJC. Tracking changes in SARS-CoV-2 Spike: evidence that D614G increases infectivity of the COVID-19 virus. 2020;182(4):812–27. e819.
105.
Zurück zum Zitat Gómez CE, Perdiguero B, Esteban MJV. Emerging SARS-CoV-2 variants and impact in global vaccination programs against SARS-CoV-2/COVID-19. 2021;9(3):243. Gómez CE, Perdiguero B, Esteban MJV. Emerging SARS-CoV-2 variants and impact in global vaccination programs against SARS-CoV-2/COVID-19. 2021;9(3):243.
107.
Zurück zum Zitat Mao K, Zhang H, Zhugen Y. An integrated biosensor system with mobile health and wastewater-based epidemiology (iBMW) for COVID-19 pandemic. Biosens Bioelectron. 2020;169:112617. Mao K, Zhang H, Zhugen Y. An integrated biosensor system with mobile health and wastewater-based epidemiology (iBMW) for COVID-19 pandemic. Biosens Bioelectron. 2020;169:112617.
Metadaten
Titel
Wastewater-Based Epidemiology (WBE) Studies for Monitoring of Covid-19 Spread
verfasst von
Bilge Alpaslan Kocamemi
Halil Kurt
Esra Erken
Ahmet Mete Saatçi
Copyright-Jahr
2022
DOI
https://doi.org/10.1007/978-3-030-95288-4_14