Skip to main content
Erschienen in: Medical & Biological Engineering & Computing 1/2019

04.08.2018 | Original Article

A Random Forest classifier-based approach in the detection of abnormalities in the retina

verfasst von: Amrita Roy Chowdhury, Tamojit Chatterjee, Sreeparna Banerjee

Erschienen in: Medical & Biological Engineering & Computing | Ausgabe 1/2019

Einloggen

Aktivieren Sie unsere intelligente Suche, um passende Fachinhalte oder Patente zu finden.

search-config
loading …

Abstract

Classification of abnormalities from medical images using computer-based approaches is of growing interest in medical imaging. Timely detection of abnormalities due to diabetic retinopathy and age-related macular degeneration is required in order to prevent the prognosis of the disease. Computer-aided systems using machine learning are becoming interesting to ophthalmologists and researchers. We present here one such technique, the Random Forest classifier, to aid medical practitioners in accurate diagnosis of the diseases. A computer-aided diagnosis system is proposed for detecting retina abnormalities, which combines K means-based segmentation of the retina image, after due preprocessing, followed by machine learning techniques, using several low level and statistical features. Abnormalities in the retina that are classified are caused by age-related macular degeneration and diabetic retinopathy. Performance measures used in the analysis are accuracy, sensitivity, specificity, F-measure, and Mathew correlation coefficient. A comparison with another machine learning technique, the Naïve Bayes classifier shows that the classification achieved by Random Forest classifier is 93.58% and it outperforms Naïve Bayes classifier which yields an accuracy of 83.63%.

Sie haben noch keine Lizenz? Dann Informieren Sie sich jetzt über unsere Produkte:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Springer Professional "Wirtschaft"

Online-Abonnement

Mit Springer Professional "Wirtschaft" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 340 Zeitschriften

aus folgenden Fachgebieten:

  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Versicherung + Risiko




Jetzt Wissensvorsprung sichern!

Literatur
1.
Zurück zum Zitat American Academy of Ophthalmology. Diabetic Retinopathy, Preferred Practice Pattern. San Francisco: American Academy of Ophthalmology, 2008. Available at: http://www.aao.org/ppp American Academy of Ophthalmology. Diabetic Retinopathy, Preferred Practice Pattern. San Francisco: American Academy of Ophthalmology, 2008. Available at: http://​www.​aao.​org/​ppp
2.
Zurück zum Zitat Early Treatment Diabetic Retinopathy Study Research Group (1991) Grading diabetic retinopathy from stereoscopic color fundus photographs—an extension of the modified Airlie House classification: ETDRS report number 10. Ophthalmology 98(5):786–806CrossRef Early Treatment Diabetic Retinopathy Study Research Group (1991) Grading diabetic retinopathy from stereoscopic color fundus photographs—an extension of the modified Airlie House classification: ETDRS report number 10. Ophthalmology 98(5):786–806CrossRef
3.
Zurück zum Zitat Crabb JW, Miyagi M, Gu X, Shadrach K, West KA, Sakaguchi H, Kamei M, Hasan A, Yan L, Rayborn ME, Salomon RG, Hollyfield JG (2002) Drusen proteome analysis: an approach to the etiology of age-related macular degeneration. Proc Natl Acad Sci U S A 99(23):14682–14687CrossRef Crabb JW, Miyagi M, Gu X, Shadrach K, West KA, Sakaguchi H, Kamei M, Hasan A, Yan L, Rayborn ME, Salomon RG, Hollyfield JG (2002) Drusen proteome analysis: an approach to the etiology of age-related macular degeneration. Proc Natl Acad Sci U S A 99(23):14682–14687CrossRef
5.
Zurück zum Zitat Anitha J, Hemanth DJ (2013) An efficient Kohonen-Fuzzy neural network based abnormal retinal image classification system. Neural Network World 2:149–167CrossRef Anitha J, Hemanth DJ (2013) An efficient Kohonen-Fuzzy neural network based abnormal retinal image classification system. Neural Network World 2:149–167CrossRef
6.
Zurück zum Zitat Abbadi NKE, Saadi EHA, Automatic detection of exudates in retinal images, IJCSI International Journal of Computer Science Issues 2013, Vol. 10, Issue 2, No 1, pp: 237–242 Abbadi NKE, Saadi EHA, Automatic detection of exudates in retinal images, IJCSI International Journal of Computer Science Issues 2013, Vol. 10, Issue 2, No 1, pp: 237–242
7.
Zurück zum Zitat Akila T, Kavitha G, Detection and classification of hard exudates in human retinal fundus images using Clustering and Random Forest methods, International Journal of Emerging Technology and Advanced Engineering 2014, Vol. 4, Special Issue 2, pp. 24–29 Akila T, Kavitha G, Detection and classification of hard exudates in human retinal fundus images using Clustering and Random Forest methods, International Journal of Emerging Technology and Advanced Engineering 2014, Vol. 4, Special Issue 2, pp. 24–29
8.
Zurück zum Zitat Jayakumari C, Santhanam T (2007) Detection of hard exudates for diabetic retinopathy using contextual clustering and fuzzy ART neural network. Asian J Information Technol 6(8):842–846 Jayakumari C, Santhanam T (2007) Detection of hard exudates for diabetic retinopathy using contextual clustering and fuzzy ART neural network. Asian J Information Technol 6(8):842–846
9.
Zurück zum Zitat Osareh A, Mirmehdi M, Thomas B, Markham R (2003) Automated identification of diabetic retinal exudates in digital colour images. Br J Ophthalmol 87(10):1220–1223CrossRef Osareh A, Mirmehdi M, Thomas B, Markham R (2003) Automated identification of diabetic retinal exudates in digital colour images. Br J Ophthalmol 87(10):1220–1223CrossRef
10.
Zurück zum Zitat Sopharak A, Uyyanonvara B, Barman S, Williamson TH (2008) Automatic detection of diabetic retinopathy exudates from non-dilated retinal images using mathematical morphology methods. Comput Med Imaging Graph 32(8):720–727CrossRef Sopharak A, Uyyanonvara B, Barman S, Williamson TH (2008) Automatic detection of diabetic retinopathy exudates from non-dilated retinal images using mathematical morphology methods. Comput Med Imaging Graph 32(8):720–727CrossRef
11.
Zurück zum Zitat R. Scherer, Multiple fuzzy classification schemes studies in fuzziness and soft computing (springer), 228 (2012) R. Scherer, Multiple fuzzy classification schemes studies in fuzziness and soft computing (springer), 228 (2012)
12.
Zurück zum Zitat Jayanthi D, Devi N, SwarnaParvathi S (2010) Automatic diagnosis of retinal diseases from color retinal images. Int J Computer Sci Information Security 7(1):234–238 Jayanthi D, Devi N, SwarnaParvathi S (2010) Automatic diagnosis of retinal diseases from color retinal images. Int J Computer Sci Information Security 7(1):234–238
13.
Zurück zum Zitat Akram MU, Khalid S, Tariq A, Khan SA, Azam F (2014) Detection and classification of retinal lesions for grading of diabetic retinopathy. Comput Biol Med 45:161–171CrossRef Akram MU, Khalid S, Tariq A, Khan SA, Azam F (2014) Detection and classification of retinal lesions for grading of diabetic retinopathy. Comput Biol Med 45:161–171CrossRef
14.
Zurück zum Zitat Niemeijer M, Ginneken BV, Russell SR, Suttorp-Schulten MS, Abramoff MD (2007) Automated detection and differentiation of drusen, exudates, and cotton-wool spots in digital color fundus photographs for diabetic retinopathy diagnosis. Investig Ophthalmol Vis Sci 48(5):2260–2267CrossRef Niemeijer M, Ginneken BV, Russell SR, Suttorp-Schulten MS, Abramoff MD (2007) Automated detection and differentiation of drusen, exudates, and cotton-wool spots in digital color fundus photographs for diabetic retinopathy diagnosis. Investig Ophthalmol Vis Sci 48(5):2260–2267CrossRef
15.
Zurück zum Zitat Niemeijer M, Ginneken BV, Staal J, Suttorp-Schulten MS, Abramoff MD (2005) Automatic detection of red lesions in digital color fundus photographs. IEEE Trans Medical Imaging 24(5):584–592CrossRef Niemeijer M, Ginneken BV, Staal J, Suttorp-Schulten MS, Abramoff MD (2005) Automatic detection of red lesions in digital color fundus photographs. IEEE Trans Medical Imaging 24(5):584–592CrossRef
16.
Zurück zum Zitat Spencer T, Olson JA, McHardy KC, Sharp PF, Forrester JV (1996) An image-processing strategy for the segmentation and quantification of microaneurysms in fluorescein angiograms of the ocular fundus. Comput Biomed Res 29(4):284–302CrossRef Spencer T, Olson JA, McHardy KC, Sharp PF, Forrester JV (1996) An image-processing strategy for the segmentation and quantification of microaneurysms in fluorescein angiograms of the ocular fundus. Comput Biomed Res 29(4):284–302CrossRef
17.
Zurück zum Zitat Frame AJ, Undrill PE, Cree MJ, Olson JA, McHardy KC, Sharp PF, Forrester JV (1998) A comparison of computer based classification methods applied to the detection of microaneurysms in ophthalmic fluorescein angiograms. Comput Biol Med 28(3):225–238CrossRef Frame AJ, Undrill PE, Cree MJ, Olson JA, McHardy KC, Sharp PF, Forrester JV (1998) A comparison of computer based classification methods applied to the detection of microaneurysms in ophthalmic fluorescein angiograms. Comput Biol Med 28(3):225–238CrossRef
18.
Zurück zum Zitat Staal J, Abramoff MD, Niemeijer M, Viergever MA, Ginneken BV (2004) Ridge- based vessel segmentation in color images of the retina. IEEE Transaction Medical Imaging 23(4):501–509CrossRef Staal J, Abramoff MD, Niemeijer M, Viergever MA, Ginneken BV (2004) Ridge- based vessel segmentation in color images of the retina. IEEE Transaction Medical Imaging 23(4):501–509CrossRef
19.
Zurück zum Zitat Niemeijer M, Abramoff MD, Ginneken BV (2009) Information fusion for diabetic retinopathy CAD in digital color fundus photographs. IEEE Transaction Medical Imaging 28(5):775–785CrossRef Niemeijer M, Abramoff MD, Ginneken BV (2009) Information fusion for diabetic retinopathy CAD in digital color fundus photographs. IEEE Transaction Medical Imaging 28(5):775–785CrossRef
20.
Zurück zum Zitat Rocha A, Carvalho T, Jelinek HF, Goldenstein S, Wainer J (2012) Points of interest and visual dictionaries for automatic retinal lesion detection. IEEE Trans Biomed Eng 59(8):2244–2253CrossRef Rocha A, Carvalho T, Jelinek HF, Goldenstein S, Wainer J (2012) Points of interest and visual dictionaries for automatic retinal lesion detection. IEEE Trans Biomed Eng 59(8):2244–2253CrossRef
21.
Zurück zum Zitat Roychowdhury S, Dara DK, Parhi KK (2014) DREAM: diabetic retinopathy analysis using machine learning. IEEE J Biomedical Health Informatics 18(5):1717–1728CrossRef Roychowdhury S, Dara DK, Parhi KK (2014) DREAM: diabetic retinopathy analysis using machine learning. IEEE J Biomedical Health Informatics 18(5):1717–1728CrossRef
22.
Zurück zum Zitat Agurto C, Barriga ES, Murray V, Nemeth S, Crammer R, Bauman W, Zamora G, Pattichis MS, Soliz P (2011) Automatic detection of diabetic retinopathy and age-related macular degeneration in digital fundus images. Invest Ophthalmol Vis Sci 52(8):5862–5871CrossRef Agurto C, Barriga ES, Murray V, Nemeth S, Crammer R, Bauman W, Zamora G, Pattichis MS, Soliz P (2011) Automatic detection of diabetic retinopathy and age-related macular degeneration in digital fundus images. Invest Ophthalmol Vis Sci 52(8):5862–5871CrossRef
23.
Zurück zum Zitat Kavakiotis I, Tsave O, Salifoglou A, Maglaveras N, Vlahavas I, Chouvarda I, Machine learning and data mining methods in Diabetes Research, Computational and Structural Biotechnology Journal 2017, Elsevier, Vol 15, pp. 104–116 Kavakiotis I, Tsave O, Salifoglou A, Maglaveras N, Vlahavas I, Chouvarda I, Machine learning and data mining methods in Diabetes Research, Computational and Structural Biotechnology Journal 2017, Elsevier, Vol 15, pp. 104–116
24.
Zurück zum Zitat Saiprasad G, Chang C, Safdar N, Saenz N, Seigel E (2013) Adrenal gland abnormality detection using Random Forest classification. J Digit Imaging 26(5):891–897CrossRef Saiprasad G, Chang C, Safdar N, Saenz N, Seigel E (2013) Adrenal gland abnormality detection using Random Forest classification. J Digit Imaging 26(5):891–897CrossRef
26.
Zurück zum Zitat Welfer D, Scharcanski J, Kitamura CM, Dal Pizzol MM, Ludwig LWB, Marinho DR (2010) Segmentation of the optic disk in color eye fundus images using an adaptive morphological approach. Comput Biol Med 40(2):124–137CrossRef Welfer D, Scharcanski J, Kitamura CM, Dal Pizzol MM, Ludwig LWB, Marinho DR (2010) Segmentation of the optic disk in color eye fundus images using an adaptive morphological approach. Comput Biol Med 40(2):124–137CrossRef
27.
Zurück zum Zitat Saha R, RoyChowdhury A, Banerjee S. Diabetic retinopathy related lesions detection and classification using machine learning technology. Springer International Publishing Switzerland, Artificial Intelligence and Soft Computing (ICAISC), 2016, Vol. 9693, pp. 734–745 Saha R, RoyChowdhury A, Banerjee S. Diabetic retinopathy related lesions detection and classification using machine learning technology. Springer International Publishing Switzerland, Artificial Intelligence and Soft Computing (ICAISC), 2016, Vol. 9693, pp. 734–745
33.
Zurück zum Zitat RoyChowdhury A, Banerjee S, Segmentation of retina images to detect abnormalities arising from diabetic retinopathy. [preprint] RoyChowdhury A, Banerjee S, Segmentation of retina images to detect abnormalities arising from diabetic retinopathy. [preprint]
34.
Zurück zum Zitat Liu D, Yu J, Otsu method and K-means, Ninth International Conference on Hybrid Intelligent Systems 2009, IEEE Computer Society, Vol. 1, pp. 344–349 Liu D, Yu J, Otsu method and K-means, Ninth International Conference on Hybrid Intelligent Systems 2009, IEEE Computer Society, Vol. 1, pp. 344–349
35.
Zurück zum Zitat Roychowdhury A, Banerjee S, Random Forests in the classification of diabetic retinopathy retinal images, Advanced Computational and Communication Paradigms, Proceedings of International Conference on Advanced Computational and Communication Paradigms (ICACCP-2017), Vol. 1, pp. 168–176 Roychowdhury A, Banerjee S, Random Forests in the classification of diabetic retinopathy retinal images, Advanced Computational and Communication Paradigms, Proceedings of International Conference on Advanced Computational and Communication Paradigms (ICACCP-2017), Vol. 1, pp. 168–176
36.
Zurück zum Zitat Breiman L (2001) Random Forests, machine learning. Springer 45(1):5–32 Breiman L (2001) Random Forests, machine learning. Springer 45(1):5–32
37.
Zurück zum Zitat Witten I, Frank E, Hall M. Data mining: practical machine learning tools and techniques.3rd Edition, Morgan Kaufmann, 2011 Witten I, Frank E, Hall M. Data mining: practical machine learning tools and techniques.3rd Edition, Morgan Kaufmann, 2011
Metadaten
Titel
A Random Forest classifier-based approach in the detection of abnormalities in the retina
verfasst von
Amrita Roy Chowdhury
Tamojit Chatterjee
Sreeparna Banerjee
Publikationsdatum
04.08.2018
Verlag
Springer Berlin Heidelberg
Erschienen in
Medical & Biological Engineering & Computing / Ausgabe 1/2019
Print ISSN: 0140-0118
Elektronische ISSN: 1741-0444
DOI
https://doi.org/10.1007/s11517-018-1878-0

Weitere Artikel der Ausgabe 1/2019

Medical & Biological Engineering & Computing 1/2019 Zur Ausgabe

Premium Partner