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Erschienen in: Cognitive Neurodynamics 5/2014

01.10.2014 | Research Article

Encoding brain network response to free viewing of videos

verfasst von: Junwei Han, Shijie Zhao, Xintao Hu, Lei Guo, Tianming Liu

Erschienen in: Cognitive Neurodynamics | Ausgabe 5/2014

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Abstract

A challenging goal for cognitive neuroscience researchers is to determine how mental representations are mapped onto the patterns of neural activity. To address this problem, functional magnetic resonance imaging (fMRI) researchers have developed a large number of encoding and decoding methods. However, previous studies typically used rather limited stimuli representation, like semantic labels and Wavelet Gabor filters, and largely focused on voxel-based brain patterns. Here, we present a new fMRI encoding model to predict the human brain’s responses to free viewing of video clips which aims to deal with this limitation. In this model, we represent the stimuli using a variety of representative visual features in the computer vision community, which can describe the global color distribution, local shape and spatial information and motion information contained in videos, and apply the functional connectivity to model the brain’s activity pattern evoked by these video clips. Our experimental results demonstrate that brain network responses during free viewing of videos can be robustly and accurately predicted across subjects by using visual features. Our study suggests the feasibility of exploring cognitive neuroscience studies by computational image/video analysis and provides a novel concept of using the brain encoding as a test-bed for evaluating visual feature extraction.

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Literatur
Zurück zum Zitat Amir A, Berg M, Chang S-F, Hsu W, Iyengar G, Lin C-Y et al (2003) IBM research TRECVID-2003 video retrieval system. NIST TRECVID-2003 Amir A, Berg M, Chang S-F, Hsu W, Iyengar G, Lin C-Y et al (2003) IBM research TRECVID-2003 video retrieval system. NIST TRECVID-2003
Zurück zum Zitat Baker S, Scharstein D, Lewis JP, Roth S, Black MJ, Szeliski R (2011) A database and evaluation methodology for optical flow. Int J Comput Vis 92(1):1–31CrossRef Baker S, Scharstein D, Lewis JP, Roth S, Black MJ, Szeliski R (2011) A database and evaluation methodology for optical flow. Int J Comput Vis 92(1):1–31CrossRef
Zurück zum Zitat Bartels A, Zeki S (2004) Functional brain mapping during free viewing of natural scenes. Hum Brain Mapp 21(2):75–85PubMedCrossRef Bartels A, Zeki S (2004) Functional brain mapping during free viewing of natural scenes. Hum Brain Mapp 21(2):75–85PubMedCrossRef
Zurück zum Zitat Bartels A, Zeki S, Logothetis NK (2008) Natural vision reveals regional specialization to local motion and to contrast-invariant, global flow in the human brain. Cereb Cortex 18(3):705–717PubMedCrossRef Bartels A, Zeki S, Logothetis NK (2008) Natural vision reveals regional specialization to local motion and to contrast-invariant, global flow in the human brain. Cereb Cortex 18(3):705–717PubMedCrossRef
Zurück zum Zitat Chen M, Han J, Hu X, Jiang X, Guo L, Liu T (2014) Survey of encoding and decoding of visual stimulus via FMRI: an image analysis perspective. Brain Imaging Behav 8(1):7–23 Chen M, Han J, Hu X, Jiang X, Guo L, Liu T (2014) Survey of encoding and decoding of visual stimulus via FMRI: an image analysis perspective. Brain Imaging Behav 8(1):7–23
Zurück zum Zitat Friston KJ (2009) Modalities, modes, and models in functional neuroimaging. Science 326(5951):399PubMedCrossRef Friston KJ (2009) Modalities, modes, and models in functional neuroimaging. Science 326(5951):399PubMedCrossRef
Zurück zum Zitat Friston KJ, Holmes AP, Poline JB, Grasby PJ, Williams SCR, Frackowiak RSJ et al (1995) Analysis of fMRI time-series revisited. Neuroimage 2(1):45–53PubMedCrossRef Friston KJ, Holmes AP, Poline JB, Grasby PJ, Williams SCR, Frackowiak RSJ et al (1995) Analysis of fMRI time-series revisited. Neuroimage 2(1):45–53PubMedCrossRef
Zurück zum Zitat Hagmann P, Cammoun L, Gigandet X, Gerhard S, Ellen Grant P, Wedeen V et al (2010) MR connectomics: principles and challenges. J Neurosci Methods 194(1):34–45PubMedCrossRef Hagmann P, Cammoun L, Gigandet X, Gerhard S, Ellen Grant P, Wedeen V et al (2010) MR connectomics: principles and challenges. J Neurosci Methods 194(1):34–45PubMedCrossRef
Zurück zum Zitat Han J, Ji X, Hu X, Zhu D, Li K, Jiang X et al (2013) Representing and retrieving video shots in human-centric brain imaging space. IEEE Trans Image Process 22(7):2723–2736PubMedCentralPubMedCrossRef Han J, Ji X, Hu X, Zhu D, Li K, Jiang X et al (2013) Representing and retrieving video shots in human-centric brain imaging space. IEEE Trans Image Process 22(7):2723–2736PubMedCentralPubMedCrossRef
Zurück zum Zitat Haxby JV, Gobbini MI, Furey ML, Ishai A, Schouten JL, Pietrini P (2001) Distributed and overlapping representations of faces and objects in ventral temporal cortex. Science 293(5539):2425–2430PubMedCrossRef Haxby JV, Gobbini MI, Furey ML, Ishai A, Schouten JL, Pietrini P (2001) Distributed and overlapping representations of faces and objects in ventral temporal cortex. Science 293(5539):2425–2430PubMedCrossRef
Zurück zum Zitat Haynes J-D, Rees G (2006) Decoding mental states from brain activity in humans. Nat Rev Neurosci 7(7):523–534PubMedCrossRef Haynes J-D, Rees G (2006) Decoding mental states from brain activity in humans. Nat Rev Neurosci 7(7):523–534PubMedCrossRef
Zurück zum Zitat Heeger DJ, Ress D (2002) What does fMRI tell us about neuronal activity? Nat Rev Neurosci 3(2):142–151PubMedCrossRef Heeger DJ, Ress D (2002) What does fMRI tell us about neuronal activity? Nat Rev Neurosci 3(2):142–151PubMedCrossRef
Zurück zum Zitat Hu X, Li K, Han J, Hua X, Guo L, Liu T (2012) Bridging the semantic gap via functional brain imaging. IEEE Trans Multimed 14(2):314–325CrossRef Hu X, Li K, Han J, Hua X, Guo L, Liu T (2012) Bridging the semantic gap via functional brain imaging. IEEE Trans Multimed 14(2):314–325CrossRef
Zurück zum Zitat Laird AR, Eickhoff SB, Kurth F, Fox PM, Uecker AM, Turner JA et al. (2009). ALE meta-analysis workflows via the brainmap database: progress towards a probabilistic functional brain atlas. Front Neuroinform 3:23 Laird AR, Eickhoff SB, Kurth F, Fox PM, Uecker AM, Turner JA et al. (2009). ALE meta-analysis workflows via the brainmap database: progress towards a probabilistic functional brain atlas. Front Neuroinform 3:23
Zurück zum Zitat Logothetis NK, Pauls J, Augath M, Trinath T, Oeltermann A (2001) Neurophysiological investigation of the basis of the fMRI signal. Nature 412(6843):150–157PubMedCrossRef Logothetis NK, Pauls J, Augath M, Trinath T, Oeltermann A (2001) Neurophysiological investigation of the basis of the fMRI signal. Nature 412(6843):150–157PubMedCrossRef
Zurück zum Zitat Lowe DG (2004) Distinctive image features from scale-invariant keypoints. Int J Comput Vis 60(2):91–110CrossRef Lowe DG (2004) Distinctive image features from scale-invariant keypoints. Int J Comput Vis 60(2):91–110CrossRef
Zurück zum Zitat Lynall M-E, Bassett DS, Kerwin R, McKenna PJ, Kitzbichler M, Muller U et al (2010) Functional connectivity and brain networks in schizophrenia. J Neurosci 30(28):9477–9487PubMedCentralPubMedCrossRef Lynall M-E, Bassett DS, Kerwin R, McKenna PJ, Kitzbichler M, Muller U et al (2010) Functional connectivity and brain networks in schizophrenia. J Neurosci 30(28):9477–9487PubMedCentralPubMedCrossRef
Zurück zum Zitat Mitchell TM, Hutchinson R, Niculescu RS, Pereira F, Wang X, Just M et al (2004) Learning to decode cognitive states from brain images. Mach Learn 57(1–2):145–175CrossRef Mitchell TM, Hutchinson R, Niculescu RS, Pereira F, Wang X, Just M et al (2004) Learning to decode cognitive states from brain images. Mach Learn 57(1–2):145–175CrossRef
Zurück zum Zitat Mitchell TM, Shinkareva SV, Carlson A, Chang K-M, Malave VL, Mason RA et al (2008) Predicting human brain activity associated with the meanings of nouns. Science 320(5880):1191–1195PubMedCrossRef Mitchell TM, Shinkareva SV, Carlson A, Chang K-M, Malave VL, Mason RA et al (2008) Predicting human brain activity associated with the meanings of nouns. Science 320(5880):1191–1195PubMedCrossRef
Zurück zum Zitat Miyawaki Y, Uchida H, Yamashita O, Sato M-A, Morito Y, Tanabe HC et al (2008) Visual image reconstruction from human brain activity using a combination of multiscale local image decoders. Neuron 60(5):915–929PubMedCrossRef Miyawaki Y, Uchida H, Yamashita O, Sato M-A, Morito Y, Tanabe HC et al (2008) Visual image reconstruction from human brain activity using a combination of multiscale local image decoders. Neuron 60(5):915–929PubMedCrossRef
Zurück zum Zitat Naselaris T, Prenger RJ, Kay KN, Oliver M, Gallant JL (2009) Bayesian reconstruction of natural images from human brain activity. Neuron 63(6):902–915PubMedCrossRef Naselaris T, Prenger RJ, Kay KN, Oliver M, Gallant JL (2009) Bayesian reconstruction of natural images from human brain activity. Neuron 63(6):902–915PubMedCrossRef
Zurück zum Zitat Nayak N, Sethi R, Song B, Roy-Chowdhury A (2011). Motion pattern analysis for modeling and recognition of complex human activities. Guide to Video Analysis of Humans: Looking at People. New York, Springer-Verlag, 289–310 Nayak N, Sethi R, Song B, Roy-Chowdhury A (2011). Motion pattern analysis for modeling and recognition of complex human activities. Guide to Video Analysis of Humans: Looking at People. New York, Springer-Verlag, 289–310
Zurück zum Zitat Nishimoto S, Vu AT, Naselaris T, Benjamini Y, Yu B, Gallant JL (2011) Reconstructing visual experiences from brain activity evoked by natural movies. Curr Biol 21(19):1641–1646PubMedCentralPubMedCrossRef Nishimoto S, Vu AT, Naselaris T, Benjamini Y, Yu B, Gallant JL (2011) Reconstructing visual experiences from brain activity evoked by natural movies. Curr Biol 21(19):1641–1646PubMedCentralPubMedCrossRef
Zurück zum Zitat Passingham RE, Stephan KE, Kotter R (2002) The anatomical basis of functional localization in the cortex. Nat Rev Neurosci 3(8):606–616PubMed Passingham RE, Stephan KE, Kotter R (2002) The anatomical basis of functional localization in the cortex. Nat Rev Neurosci 3(8):606–616PubMed
Zurück zum Zitat Polyn SM, Natu VS, Cohen JD, Norman KA (2005) Category-specific cortical activity precedes retrieval during memory search. Science 310(5756):1963–1966PubMedCrossRef Polyn SM, Natu VS, Cohen JD, Norman KA (2005) Category-specific cortical activity precedes retrieval during memory search. Science 310(5756):1963–1966PubMedCrossRef
Zurück zum Zitat Richiardi J, Eryilmaz H, Schwartz S, Vuilleumier P, Van De Ville D (2011) Decoding brain states from fMRI connectivity graphs. Neuroimage 56(2):616–626PubMedCrossRef Richiardi J, Eryilmaz H, Schwartz S, Vuilleumier P, Van De Ville D (2011) Decoding brain states from fMRI connectivity graphs. Neuroimage 56(2):616–626PubMedCrossRef
Zurück zum Zitat Schneider W, Eschman A, Zuccolotto A (2002). E-Prime reference guide: Psychology Software Tools, Incorporated Schneider W, Eschman A, Zuccolotto A (2002). E-Prime reference guide: Psychology Software Tools, Incorporated
Zurück zum Zitat Shirer WR, Ryali S, Rykhlevskaia E, Menon V, Greicius MD (2012) Decoding subject-driven cognitive states with whole-brain connectivity patterns. Cereb Cortex 22(1):158–165PubMedCentralPubMedCrossRef Shirer WR, Ryali S, Rykhlevskaia E, Menon V, Greicius MD (2012) Decoding subject-driven cognitive states with whole-brain connectivity patterns. Cereb Cortex 22(1):158–165PubMedCentralPubMedCrossRef
Zurück zum Zitat Smeaton AF, Over P, Kraaij W (2006) Evaluation campaigns and TRECVid. In: Proceedings of the 8th ACM international workshop on multimedia information retrieval, ACM, pp 321–330 Smeaton AF, Over P, Kraaij W (2006) Evaluation campaigns and TRECVid. In: Proceedings of the 8th ACM international workshop on multimedia information retrieval, ACM, pp 321–330
Zurück zum Zitat Sterzer P, Haynes, J-D, Rees G (2008). Fine-scale activity patterns in high-level visual areas encode the category of invisible objects. J Vis 8(15):10 Sterzer P, Haynes, J-D, Rees G (2008). Fine-scale activity patterns in high-level visual areas encode the category of invisible objects. J Vis 8(15):10
Zurück zum Zitat Sugase-Miyamoto Y, Matsumoto N, Kawano K (2011) Role of temporal processing stages by inferior temporal neurons in facial recognition. Front Psychol 2:141 Sugase-Miyamoto Y, Matsumoto N, Kawano K (2011) Role of temporal processing stages by inferior temporal neurons in facial recognition. Front Psychol 2:141
Zurück zum Zitat Suykens JAK, Vandewalle J (1999) Least squares support vector machine classifiers. Neural Process Lett 9(3):293–300CrossRef Suykens JAK, Vandewalle J (1999) Least squares support vector machine classifiers. Neural Process Lett 9(3):293–300CrossRef
Zurück zum Zitat Thirion B, Pinel P, Mériaux S, Roche A, Dehaene S, Poline J-B (2007) Analysis of a large fMRI cohort: statistical and methodological issues for group analyses. Neuroimage 35(1):105–120PubMedCrossRef Thirion B, Pinel P, Mériaux S, Roche A, Dehaene S, Poline J-B (2007) Analysis of a large fMRI cohort: statistical and methodological issues for group analyses. Neuroimage 35(1):105–120PubMedCrossRef
Zurück zum Zitat Van De Sande KEA, Gevers T, Snoek CGM (2010) Evaluating color descriptors for object and scene recognition. IEEE Trans Pattern Anal Mach Intell 32(9):1582–1596PubMedCrossRef Van De Sande KEA, Gevers T, Snoek CGM (2010) Evaluating color descriptors for object and scene recognition. IEEE Trans Pattern Anal Mach Intell 32(9):1582–1596PubMedCrossRef
Zurück zum Zitat Walther DB, Caddigan E, Fei-Fei L, Beck DM (2009) Natural scene categories revealed in distributed patterns of activity in the human brain. J Neurosci 29(34):10573–10581PubMedCentralPubMedCrossRef Walther DB, Caddigan E, Fei-Fei L, Beck DM (2009) Natural scene categories revealed in distributed patterns of activity in the human brain. J Neurosci 29(34):10573–10581PubMedCentralPubMedCrossRef
Zurück zum Zitat Zhang T, Guo L, Li K, Jing C, Yin Y, Zhu D et al (2012) Predicting functional cortical ROIs via DTI-derived fiber shape models. Cereb Cortex 22(4):854–864PubMedCentralPubMedCrossRef Zhang T, Guo L, Li K, Jing C, Yin Y, Zhu D et al (2012) Predicting functional cortical ROIs via DTI-derived fiber shape models. Cereb Cortex 22(4):854–864PubMedCentralPubMedCrossRef
Zurück zum Zitat Zhu D, Li K, Faraco CC, Deng F, Zhang D, Guo L et al (2012) Optimization of functional brain ROIs via maximization of consistency of structural connectivity profiles. Neuroimage 59(2):1382–1393PubMedCentralPubMedCrossRef Zhu D, Li K, Faraco CC, Deng F, Zhang D, Guo L et al (2012) Optimization of functional brain ROIs via maximization of consistency of structural connectivity profiles. Neuroimage 59(2):1382–1393PubMedCentralPubMedCrossRef
Zurück zum Zitat Zhu D, Li K, Guo L, Jiang X, Zhang T, Zhang D et al (2013) DICCCOL: dense individualized and common connectivity-based cortical landmarks. Cereb Cortex 23(4):786–800PubMedCentralPubMedCrossRef Zhu D, Li K, Guo L, Jiang X, Zhang T, Zhang D et al (2013) DICCCOL: dense individualized and common connectivity-based cortical landmarks. Cereb Cortex 23(4):786–800PubMedCentralPubMedCrossRef
Metadaten
Titel
Encoding brain network response to free viewing of videos
verfasst von
Junwei Han
Shijie Zhao
Xintao Hu
Lei Guo
Tianming Liu
Publikationsdatum
01.10.2014
Verlag
Springer Netherlands
Erschienen in
Cognitive Neurodynamics / Ausgabe 5/2014
Print ISSN: 1871-4080
Elektronische ISSN: 1871-4099
DOI
https://doi.org/10.1007/s11571-014-9291-3

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