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2015 | OriginalPaper | Buchkapitel

Gaussian Processes for Slice-Based Super-Resolution MR Images

verfasst von : Hernán Darío Vargas Cardona, Andrés F. López-Lopera, Álvaro A. Orozco, Mauricio A. Álvarez, Juan Antonio Hernández Tamames, Norberto Malpica

Erschienen in: Advances in Visual Computing

Verlag: Springer International Publishing

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Abstract

Magnetic resonance imaging (MRI) is a medical technique used in radiology to obtain anatomical images of healthy and pathological tissues. Due to hardware limitations and clinical protocols, MRI data are often acquired with low-resolution. For this reason, the scientific community has been developing super-resolution (SR) methodologies in order to enhance spatial resolution through post-processing of 2D multi-slice images. The enhancement of spatial resolution in magnetic resonance (MR) images improves clinical procedures such as tissue segmentation, registration and disease diagnosis. Several methods to perform SR-MR images have been proposed. However, they present different drawbacks: sensitivity to noise, high computational cost, and complex optimization algorithms. In this paper, we develop a supervised learning methodology to perform SR-MR images using a patch-based Gaussian process regression (GPR) method. We compare our approach with nearest-neighbor interpolation, B-splines and a SR-GPR scheme based on nearest-neighbors. We test our SR-GPR algorithm in MRI-T1 and MRI-T2 studies, evaluating the performance through error metrics and morphological validation (tissue segmentation). Results obtained with our methodology outperform the other alternatives for all validation protocols.

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Literatur
1.
Zurück zum Zitat Hollingworth, W., Todd, C., Bell, M., Arafat, Q., Girling, S., Karia, K., Dixon, A.K.: The diagnostic and therapeutic impact of MRI: an observational multi-centre study. Clin. Radiol. 55, 825–831 (2000)CrossRef Hollingworth, W., Todd, C., Bell, M., Arafat, Q., Girling, S., Karia, K., Dixon, A.K.: The diagnostic and therapeutic impact of MRI: an observational multi-centre study. Clin. Radiol. 55, 825–831 (2000)CrossRef
2.
Zurück zum Zitat Isaac, J., Kulkarni, J.: Super resolution techniques for medical image processing. In: International Conference on Technologies for Sustainable Development (ICTSD), pp. 1–6 (2015) Isaac, J., Kulkarni, J.: Super resolution techniques for medical image processing. In: International Conference on Technologies for Sustainable Development (ICTSD), pp. 1–6 (2015)
3.
Zurück zum Zitat Hefnawy, A.: An efficient super-resolution approach for obtaining isotropic 3-D imaging using 2-D multi-slice MRI. Egypt. Inf. J. 14, 117–123 (2013)CrossRef Hefnawy, A.: An efficient super-resolution approach for obtaining isotropic 3-D imaging using 2-D multi-slice MRI. Egypt. Inf. J. 14, 117–123 (2013)CrossRef
4.
Zurück zum Zitat Malczewski, K.: Inter-K-space motion based strategy for super-resolution in MRI. In: 17th European Signal Processing Conference, pp. 30–34 (2009) Malczewski, K.: Inter-K-space motion based strategy for super-resolution in MRI. In: 17th European Signal Processing Conference, pp. 30–34 (2009)
5.
Zurück zum Zitat Carmi, E., Liu, S., Alon, N., Fiat, A., Fiat, D.: Resolution enhancement in MRI. Magn. Reson. Imaging 24, 133–154 (2006)CrossRef Carmi, E., Liu, S., Alon, N., Fiat, A., Fiat, D.: Resolution enhancement in MRI. Magn. Reson. Imaging 24, 133–154 (2006)CrossRef
6.
Zurück zum Zitat Huang, T., Tsai, R.: Multi-frame image restoration and registration. In: Advances in Computer Vision and Image Processing, vol. 1, pp. 317–339 (1984) Huang, T., Tsai, R.: Multi-frame image restoration and registration. In: Advances in Computer Vision and Image Processing, vol. 1, pp. 317–339 (1984)
7.
Zurück zum Zitat Kim, S., Bose, N., Valenzuela, H.: Recursive reconstruction of high resolution image from noisy undersampled frames. IEEE Trans. Acoust. Speech Sig. Process. 38, 1013–1027 (1990)CrossRef Kim, S., Bose, N., Valenzuela, H.: Recursive reconstruction of high resolution image from noisy undersampled frames. IEEE Trans. Acoust. Speech Sig. Process. 38, 1013–1027 (1990)CrossRef
8.
Zurück zum Zitat Patti, A., Sezan, M., Teklap, A.: High-resolution image reconstruction from a low-resolution image sequence in the presence of time-varying motion blur. In: Proceedings of ICIP, pp. 343–337 (1994) Patti, A., Sezan, M., Teklap, A.: High-resolution image reconstruction from a low-resolution image sequence in the presence of time-varying motion blur. In: Proceedings of ICIP, pp. 343–337 (1994)
9.
Zurück zum Zitat Greenspan, H., Oz, G., Kiryati, N., Peled, S.: MRI inter-slice reconstruction using super resolution. Magn. Reson. Imaging 20, 437–446 (2002)CrossRef Greenspan, H., Oz, G., Kiryati, N., Peled, S.: MRI inter-slice reconstruction using super resolution. Magn. Reson. Imaging 20, 437–446 (2002)CrossRef
10.
Zurück zum Zitat Aguena, M., Mascarenhas, N., Anacleto, J., Fels, S.: MRI iterative super resolution with Wiener filter regularization. In: XXVI Conference on Graphics, Patterns and Images, pp. 155–162 (2013) Aguena, M., Mascarenhas, N., Anacleto, J., Fels, S.: MRI iterative super resolution with Wiener filter regularization. In: XXVI Conference on Graphics, Patterns and Images, pp. 155–162 (2013)
11.
Zurück zum Zitat Jafari-Khouzani, K.: MRI upsampling using feature-based nonlocal means approach. IEEE Trans. Med. Imaging 30, 1969–1985 (2014)CrossRef Jafari-Khouzani, K.: MRI upsampling using feature-based nonlocal means approach. IEEE Trans. Med. Imaging 30, 1969–1985 (2014)CrossRef
12.
Zurück zum Zitat Lu, Y., Yang, R.: Super-resolution reconstruction of dynamic MRI by patch learning. In: 12th International Conference on Control, Automation, Robotics and Vision, pp. 1443–1448 (2012) Lu, Y., Yang, R.: Super-resolution reconstruction of dynamic MRI by patch learning. In: 12th International Conference on Control, Automation, Robotics and Vision, pp. 1443–1448 (2012)
13.
Zurück zum Zitat Rousseau, F., Studholme, C.: A supervised patch-based image reconstruction technique: application to brain MRI super-resolution. In: 10th International Symposium on Biomedical Imaging, pp. 346–349 (2013) Rousseau, F., Studholme, C.: A supervised patch-based image reconstruction technique: application to brain MRI super-resolution. In: 10th International Symposium on Biomedical Imaging, pp. 346–349 (2013)
14.
Zurück zum Zitat Rueda, A., Malpica, N., Romero, E.: Single-image super-resolution of brain MR images using overcomplete dictionaries. Med. Image Anal. 17, 113–132 (2012)CrossRef Rueda, A., Malpica, N., Romero, E.: Single-image super-resolution of brain MR images using overcomplete dictionaries. Med. Image Anal. 17, 113–132 (2012)CrossRef
15.
Zurück zum Zitat Wang, Y., Qiao, J., Jun-bao, L., Ping-Fu, A., Shu-Chuan, C., Rodd, J.: Sparse representation-based MRI super-resolution reconstruction. Meas. 47, 946–953 (2012)CrossRef Wang, Y., Qiao, J., Jun-bao, L., Ping-Fu, A., Shu-Chuan, C., Rodd, J.: Sparse representation-based MRI super-resolution reconstruction. Meas. 47, 946–953 (2012)CrossRef
16.
Zurück zum Zitat Jog, A., Carass, A., Prince, J.: Improving magnetic resonance resolution with supervised learning. In: IEEE 11th International Symposium on Biomedical Imaging (ISBI), pp. 987–990 (2014) Jog, A., Carass, A., Prince, J.: Improving magnetic resonance resolution with supervised learning. In: IEEE 11th International Symposium on Biomedical Imaging (ISBI), pp. 987–990 (2014)
17.
Zurück zum Zitat Rasmussen, C.E., Williams, C.K.I.: Gaussian Processes for Machine Learning (Adaptive Computation and Machine Learning). The MIT Press, Cambridge (2005) Rasmussen, C.E., Williams, C.K.I.: Gaussian Processes for Machine Learning (Adaptive Computation and Machine Learning). The MIT Press, Cambridge (2005)
18.
Zurück zum Zitat Murphy, K.P.: Machine Learning: A Probabilistic Perspective (Adaptive Computation And Machine Learning Series). The MIT Press, Cambridge (2012) Murphy, K.P.: Machine Learning: A Probabilistic Perspective (Adaptive Computation And Machine Learning Series). The MIT Press, Cambridge (2012)
19.
Zurück zum Zitat He, H., Siu, W.C.: Single image super-resolution using Gaussian process regression. In: IEEE Conference on Computer Vision and Pattern Recognition (CVPR), pp. 449–456 (2011) He, H., Siu, W.C.: Single image super-resolution using Gaussian process regression. In: IEEE Conference on Computer Vision and Pattern Recognition (CVPR), pp. 449–456 (2011)
20.
Zurück zum Zitat Barmpoutis, A., Vemuri, B., Shepherd, T., Forder, J.: Tensor splines for interpolation and approximation of DT-MRI with applications to segmentation of isolated rat hippocampi. IEEE Trans. Med. Imaging 26, 1537–1546 (2007)CrossRef Barmpoutis, A., Vemuri, B., Shepherd, T., Forder, J.: Tensor splines for interpolation and approximation of DT-MRI with applications to segmentation of isolated rat hippocampi. IEEE Trans. Med. Imaging 26, 1537–1546 (2007)CrossRef
21.
Zurück zum Zitat Kikinis, R., Pieper, S.D., Vosburgh, K.G.: 3D slicer: a platform for subject-specific image analysis, visualization, and clinical support. In: Jolesz, F.A. (ed.) Intraoperative Imaging and Image-Guided Therapy, pp. 277–289. Springer, New York (2014)CrossRef Kikinis, R., Pieper, S.D., Vosburgh, K.G.: 3D slicer: a platform for subject-specific image analysis, visualization, and clinical support. In: Jolesz, F.A. (ed.) Intraoperative Imaging and Image-Guided Therapy, pp. 277–289. Springer, New York (2014)CrossRef
Metadaten
Titel
Gaussian Processes for Slice-Based Super-Resolution MR Images
verfasst von
Hernán Darío Vargas Cardona
Andrés F. López-Lopera
Álvaro A. Orozco
Mauricio A. Álvarez
Juan Antonio Hernández Tamames
Norberto Malpica
Copyright-Jahr
2015
DOI
https://doi.org/10.1007/978-3-319-27863-6_65

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