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Erschienen in: Measurement Techniques 1/2023

31.05.2023 | MEDICAL AND BIOLOGICAL MEASUREMENTS

Metrological Support of Nucleic Acid Sequence Analysis

verfasst von: O. N. Melkova, E. V. Kulyabina, S. Yu. Fomina, A. A. Volkov

Erschienen in: Measurement Techniques | Ausgabe 1/2023

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Abstract

Metrological support for the process of molecular genetic identification is proposed. An establishment of a nucleotide sequence is the main objective of the DNA/RNA analysis. Such nucleotide sequence provides key information about the role and function of nucleic acids in living systems, as well as the origin of biological objects during molecular genetic identification. The molecular genetic identification is based on the modern methods of studying DNA sequences, which are inherited by the living organisms from generation to generation. In some cases, comparison of DNA sequences is required to establish the authenticity of biological objects, as well as determine biological affiliation or kinship with other biological objects. The problems of metrological support of molecular genetic identification by Sanger DNA sequencing using fluorescent-labeled reaction terminators and capillary electrophoresis are considered. Methods and means of metrological support of the DNA/RNA analysis were developed, which include the determination of a nucleotide as a nucleic acid monomer, the use of a nucleotide sequence of nucleic acids used in certified methods and procedures, the use of a genetic analyzer as a measurement tool along with related auxiliary equipment, as well as the use of a standard sample of a fragment of human mitochondrial DNA has been developed and approved. A Nanofor 05 domestic genome analyzer was tested. The following two procedures were developed and certified: for measuring the nucleotide sequence of the section of the control region of mitochondrial DNA of fish (sturgeon and paddlefish families) by Sanger sequencing, and for measuring the nucleotide sequence of the 5' region of the COI gene of the mitochondrial DNA of aquatic biological resources by Sanger sequencing. Both measurement procedures are based on the use of fluorescent-labeled reaction terminators and capillary electrophoresis. The results are important for use in the DNA studies in the field of biological sciences, food industry, biotechnology, and DNA forensics.

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Fußnoten
1
NCBI website: https://​www.​ncbi.​nlm.​nih.​gov (access date: 09/01/2022).
 
2
GISAID website: https://​www.​gisaid.​org/​hcov19-variants/​ (access date: 09/01/2022).
 
3
Decree No. 879 of the Government of the Russian Federation "On Approval of the Regulation on Units of Measurement allowed for use in the Russian Federation" dated October 31, 2009.
 
4
GOST 30812-2002. Raw materials and food products. Method for the identifi cation of sturgeon caviar.
 
5
Criminal Code of the Russian Federation No. 63-FZ dated 06/13/1996 (as amended on 12/29/2022). Article 258.1: Illegal acquisition and trafficking of highly valued wild animals and aquatic biological resources representing species entered in the Red Book of the Russian Federation and/or protected by the international agreements of the Russian Federation.
 
6
FIF EUM website: https://​fgis.​gost.​ru/​fundmetrology/​registry/​19 (access date: 12/06/2022).
 
Literatur
Metadaten
Titel
Metrological Support of Nucleic Acid Sequence Analysis
verfasst von
O. N. Melkova
E. V. Kulyabina
S. Yu. Fomina
A. A. Volkov
Publikationsdatum
31.05.2023
Verlag
Springer US
Erschienen in
Measurement Techniques / Ausgabe 1/2023
Print ISSN: 0543-1972
Elektronische ISSN: 1573-8906
DOI
https://doi.org/10.1007/s11018-023-02192-y

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