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Erschienen in: Cognitive Processing 4/2013

01.11.2013 | Research Report

Optimal spatial filtering for brain oscillatory activity using the Relevance Vector Machine

verfasst von: P. Belardinelli, A. Jalava, J. Gross, J. Kujala, R. Salmelin

Erschienen in: Cognitive Processing | Ausgabe 4/2013

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Abstract

Over the past decade, various techniques have been proposed for localization of cerebral sources of oscillatory activity on the basis of magnetoencephalography (MEG) or electroencephalography recordings. Beamformers in the frequency domain, in particular, have proved useful in this endeavor. However, the localization accuracy and efficacy of such spatial filters can be markedly limited by bias from correlation between cerebral sources and short duration of source activity, both essential issues in the localization of brain data. Here, we evaluate a method for frequency-domain localization of oscillatory neural activity based on the relevance vector machine (RVM). RVM is a Bayesian algorithm for learning sparse models from possibly overcomplete data sets. The performance of our frequency-domain RVM method (fdRVM) was compared with that of dynamic imaging of coherent sources (DICS), a frequency-domain spatial filter that employs a minimum variance adaptive beamformer (MVAB) approach. The methods were tested both on simulated and real data. Two types of simulated MEG data sets were generated, one with continuous source activity and the other with transiently active sources. The real data sets were from slow finger movements and resting state. Results from simulations show comparable performance for DICS and fdRVM at high signal-to-noise ratios and low correlation. At low SNR or in conditions of high correlation between sources, fdRVM performs markedly better. fdRVM was successful on real data as well, indicating salient focal activations in the sensorimotor area. The resulting high spatial resolution of fdRVM and its sensitivity to low-SNR transient signals could be particularly beneficial when mapping event-related changes of oscillatory activity.

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Literatur
Zurück zum Zitat Auranen T, Nummenmaa A, Hämäläinen MS, Jääskeläinen IP, Lampinen J, Vehtari A, Sams M (2005) Bayesian analysis of the neuromagnetic inverse problem with lp-norm priors. Neuroimage 26:870–884PubMedCrossRef Auranen T, Nummenmaa A, Hämäläinen MS, Jääskeläinen IP, Lampinen J, Vehtari A, Sams M (2005) Bayesian analysis of the neuromagnetic inverse problem with lp-norm priors. Neuroimage 26:870–884PubMedCrossRef
Zurück zum Zitat Baillet S, Mosher JC, Leahy RM (2001) Electromagnetic brain mapping. IEEE Signal Process Mag 18:14–30CrossRef Baillet S, Mosher JC, Leahy RM (2001) Electromagnetic brain mapping. IEEE Signal Process Mag 18:14–30CrossRef
Zurück zum Zitat Belardinelli P, Ciancetta L, Staudt M, Pizzella V, Londei A, Birbaumer N, Romani GL, Braun C (2007) Cerebro-muscular and cerebro-cerebral coherence in patients with pre- and perinatally acquired unilateral brain lesions. Neuroimage 37:1301–1314PubMedCrossRef Belardinelli P, Ciancetta L, Staudt M, Pizzella V, Londei A, Birbaumer N, Romani GL, Braun C (2007) Cerebro-muscular and cerebro-cerebral coherence in patients with pre- and perinatally acquired unilateral brain lesions. Neuroimage 37:1301–1314PubMedCrossRef
Zurück zum Zitat Belardinelli P, Ortiz E, Barnes G, Noppeney U, Preissl H (2012) Source reconstruction accuracy of MEG and EEG Bayesian inversion approaches. PLoS ONE 7:e51985PubMedCrossRef Belardinelli P, Ortiz E, Barnes G, Noppeney U, Preissl H (2012) Source reconstruction accuracy of MEG and EEG Bayesian inversion approaches. PLoS ONE 7:e51985PubMedCrossRef
Zurück zum Zitat Brookes MJ, Gibson AM, Hall SD, Furlong PL, Barnes GR, Hillebrand A, Singh KD, Holliday IE, Francis ST, Morris PG (2004) A general linear model for MEG beamformer imaging. Neuroimage 23:936–946PubMedCrossRef Brookes MJ, Gibson AM, Hall SD, Furlong PL, Barnes GR, Hillebrand A, Singh KD, Holliday IE, Francis ST, Morris PG (2004) A general linear model for MEG beamformer imaging. Neuroimage 23:936–946PubMedCrossRef
Zurück zum Zitat Dalal SS, Sekihara K, Nagarajan SS (2006) Modified beamformers for coherent source region suppression. IEEE Transact Biomed Eng 53:1357–1363CrossRef Dalal SS, Sekihara K, Nagarajan SS (2006) Modified beamformers for coherent source region suppression. IEEE Transact Biomed Eng 53:1357–1363CrossRef
Zurück zum Zitat Dalal SS, Guggisberg AG, Edwards E, Sekihara K, Findlay AM, Canolty RT, Knight RT, Barbaro NM, Kirsch HE, Nagarajan SS (2007) Spatial localization of cortical time-frequency dynamics. Conf Proc IEEE Eng Med Biol Soc 2007:4941–4944PubMed Dalal SS, Guggisberg AG, Edwards E, Sekihara K, Findlay AM, Canolty RT, Knight RT, Barbaro NM, Kirsch HE, Nagarajan SS (2007) Spatial localization of cortical time-frequency dynamics. Conf Proc IEEE Eng Med Biol Soc 2007:4941–4944PubMed
Zurück zum Zitat Daskalakis ZJ, Christensen BK, Fitzgerald PB, Roshan L, Chen R (2002) The mechanisms of interhemispheric inhibition in the human motor cortex. J Physiol 543:317–326PubMedCrossRef Daskalakis ZJ, Christensen BK, Fitzgerald PB, Roshan L, Chen R (2002) The mechanisms of interhemispheric inhibition in the human motor cortex. J Physiol 543:317–326PubMedCrossRef
Zurück zum Zitat Friston KJ, Glaser DE, Henson RNA, Kiebel S, Phillips C, Ashburner J (2002) Classical and Bayesian inference in neuroimaging: applications. Neuroimage 16:484–512PubMedCrossRef Friston KJ, Glaser DE, Henson RNA, Kiebel S, Phillips C, Ashburner J (2002) Classical and Bayesian inference in neuroimaging: applications. Neuroimage 16:484–512PubMedCrossRef
Zurück zum Zitat Friston K, Chu C, Mourão-Miranda J, Hulme O, Rees G, Penny W, Ashburner J (2008a) Bayesian decoding of brain images. Neuroimage 39:181–205PubMedCrossRef Friston K, Chu C, Mourão-Miranda J, Hulme O, Rees G, Penny W, Ashburner J (2008a) Bayesian decoding of brain images. Neuroimage 39:181–205PubMedCrossRef
Zurück zum Zitat Friston K, Harrison L, Daunizeau J, Kiebel S, Phillips C, Trujillo-Barreto N, Henson R, Flandin G, Mattout J (2008b) Multiple sparse priors for the M/EEG inverse problem. Neuroimage 39:1104–1120PubMedCrossRef Friston K, Harrison L, Daunizeau J, Kiebel S, Phillips C, Trujillo-Barreto N, Henson R, Flandin G, Mattout J (2008b) Multiple sparse priors for the M/EEG inverse problem. Neuroimage 39:1104–1120PubMedCrossRef
Zurück zum Zitat Ghosh A, Rho Y, McIntosh A, Kötter R, Jirsa V (2008) Noise during rest enables the exploration of the brain’s dynamic repertoire. PLoS Comput Biol 4:e1000196PubMedCrossRef Ghosh A, Rho Y, McIntosh A, Kötter R, Jirsa V (2008) Noise during rest enables the exploration of the brain’s dynamic repertoire. PLoS Comput Biol 4:e1000196PubMedCrossRef
Zurück zum Zitat Gross J, Ioannides A (1999) Linear transformations of data space in MEG. Phys Med Biol 44:2081–2097PubMedCrossRef Gross J, Ioannides A (1999) Linear transformations of data space in MEG. Phys Med Biol 44:2081–2097PubMedCrossRef
Zurück zum Zitat Gross J, Kujala J, Hamalainen M, Timmermann L, Schnitzler A, Salmelin R (2001) Dynamic imaging of coherent sources: studying neural interactions in the human brain. Proc Natl Acad Sci 98:694–699PubMedCrossRef Gross J, Kujala J, Hamalainen M, Timmermann L, Schnitzler A, Salmelin R (2001) Dynamic imaging of coherent sources: studying neural interactions in the human brain. Proc Natl Acad Sci 98:694–699PubMedCrossRef
Zurück zum Zitat Gross J, Timmermann L, Kujala J, Dirks M, Schmitz F, Salmelin R, Schnitzler A (2002) The neural basis of intermittent motor control in humans. Proc Natl Acad Sci 99:2299–2302PubMedCrossRef Gross J, Timmermann L, Kujala J, Dirks M, Schmitz F, Salmelin R, Schnitzler A (2002) The neural basis of intermittent motor control in humans. Proc Natl Acad Sci 99:2299–2302PubMedCrossRef
Zurück zum Zitat Hari R, Salmelin R (1997) Human cortical oscillations: a neuromagnetic view through the skull. Trends Neurosci 20:44–48PubMedCrossRef Hari R, Salmelin R (1997) Human cortical oscillations: a neuromagnetic view through the skull. Trends Neurosci 20:44–48PubMedCrossRef
Zurück zum Zitat Hirschmann J, Özkurt T, Butz M, Homburger M, Elben S, Hartmann C, Vesper J, Wojtecki L, Schnitzler A (2011) Distinct oscillatory STN-cortical loops revealed by simultaneous MEG and local field potential recordings in patients with Parkinson’s disease. Neuroimage 55:1159–1168PubMedCrossRef Hirschmann J, Özkurt T, Butz M, Homburger M, Elben S, Hartmann C, Vesper J, Wojtecki L, Schnitzler A (2011) Distinct oscillatory STN-cortical loops revealed by simultaneous MEG and local field potential recordings in patients with Parkinson’s disease. Neuroimage 55:1159–1168PubMedCrossRef
Zurück zum Zitat Jensen O, Vanni S (2002) A new method to identify multiple sources of oscillatory activity from magnetoencephalographic data. Neuroimage 15:568–574PubMedCrossRef Jensen O, Vanni S (2002) A new method to identify multiple sources of oscillatory activity from magnetoencephalographic data. Neuroimage 15:568–574PubMedCrossRef
Zurück zum Zitat Jerbi K, Lachaux JP, N’Diaye K, Pantazis D, Leahy RM, Garnero L, Baillet S (2007) Coherent neural representation of hand speed in humans revealed by MEG imaging. Proc Natl Acad Sci 104:7676–7681PubMedCrossRef Jerbi K, Lachaux JP, N’Diaye K, Pantazis D, Leahy RM, Garnero L, Baillet S (2007) Coherent neural representation of hand speed in humans revealed by MEG imaging. Proc Natl Acad Sci 104:7676–7681PubMedCrossRef
Zurück zum Zitat Kujala J, Pammer K, Cornelissen P, Roebroeck A, Formisano E, Salmelin R (2007) Phase coupling in a cerebro-cerebellar network at 8–13 Hz during reading. Cereb Cortex 17:1476–1485PubMedCrossRef Kujala J, Pammer K, Cornelissen P, Roebroeck A, Formisano E, Salmelin R (2007) Phase coupling in a cerebro-cerebellar network at 8–13 Hz during reading. Cereb Cortex 17:1476–1485PubMedCrossRef
Zurück zum Zitat Liljeström M, Kujala J, Jensen O, Salmelin R (2005) Neuromagnetic localization of rhythmic activity in the human brain: a comparison of three methods. Neuroimage 25:734–745PubMedCrossRef Liljeström M, Kujala J, Jensen O, Salmelin R (2005) Neuromagnetic localization of rhythmic activity in the human brain: a comparison of three methods. Neuroimage 25:734–745PubMedCrossRef
Zurück zum Zitat Mazaheri A, Nieuwenhuis ILC, van Dijk H, Jensen O (2009) Prestimulus alpha and mu activity predicts failure to inhibit motor responses. Hum Brain Mapp 30:1791–1800PubMedCrossRef Mazaheri A, Nieuwenhuis ILC, van Dijk H, Jensen O (2009) Prestimulus alpha and mu activity predicts failure to inhibit motor responses. Hum Brain Mapp 30:1791–1800PubMedCrossRef
Zurück zum Zitat Mosher JC, Baillet S, Leahy RM (2004) Equivalence of linear approaches in bioelectromagnetic inverse solutions. IEEE Workshop on Statistical Signal Processing, pp 294–297 Mosher JC, Baillet S, Leahy RM (2004) Equivalence of linear approaches in bioelectromagnetic inverse solutions. IEEE Workshop on Statistical Signal Processing, pp 294–297
Zurück zum Zitat Nolte G, Bai O, Wheaton L, Mari Z, Vorbach S, Hallett M (2004) Identifying true brain interaction from EEG data using the imaginary part of coherency. Clin Neurophysiol 115:2292–2307PubMedCrossRef Nolte G, Bai O, Wheaton L, Mari Z, Vorbach S, Hallett M (2004) Identifying true brain interaction from EEG data using the imaginary part of coherency. Clin Neurophysiol 115:2292–2307PubMedCrossRef
Zurück zum Zitat Nummenmaa A, Auranen T, Hämäläinen MS, Jääskeläinen IP, Lampinen J, Sams M, Vehtari A (2007) Hierarchical Bayesian estimates of distributed MEG sources: theoretical aspects and comparison of variational and MCMC methods. Neuroimage 35:669–685PubMedCrossRef Nummenmaa A, Auranen T, Hämäläinen MS, Jääskeläinen IP, Lampinen J, Sams M, Vehtari A (2007) Hierarchical Bayesian estimates of distributed MEG sources: theoretical aspects and comparison of variational and MCMC methods. Neuroimage 35:669–685PubMedCrossRef
Zurück zum Zitat Osipova D, Takashima A, Oostenveld R, Fernández G, Maris E, Jensen O (2006) Theta and gamma oscillations predict encoding and retrieval of declarative memory. J Neurosci 26:7523–7531PubMedCrossRef Osipova D, Takashima A, Oostenveld R, Fernández G, Maris E, Jensen O (2006) Theta and gamma oscillations predict encoding and retrieval of declarative memory. J Neurosci 26:7523–7531PubMedCrossRef
Zurück zum Zitat Pfurtscheller G, Lopes da Silva FH (1999) Event-related EEG/MEG synchronization and desynchronization: basic principles. Clin Neurophysiol 110:1842–1857PubMedCrossRef Pfurtscheller G, Lopes da Silva FH (1999) Event-related EEG/MEG synchronization and desynchronization: basic principles. Clin Neurophysiol 110:1842–1857PubMedCrossRef
Zurück zum Zitat Phillips C, Mattout J, Rugg M, Maquet P, Friston K (2005) An empirical Bayesian solution to the source reconstruction problem in EEG. Neuroimage 24:997–1011PubMedCrossRef Phillips C, Mattout J, Rugg M, Maquet P, Friston K (2005) An empirical Bayesian solution to the source reconstruction problem in EEG. Neuroimage 24:997–1011PubMedCrossRef
Zurück zum Zitat Salmelin R, Hari R (1994) Characterization of spontaneous MEG rhythms in healthy adults. Electroencephalogr Clin Neurophysiol 91:237–248PubMedCrossRef Salmelin R, Hari R (1994) Characterization of spontaneous MEG rhythms in healthy adults. Electroencephalogr Clin Neurophysiol 91:237–248PubMedCrossRef
Zurück zum Zitat Sato M, Yoshioka T, Kajihara S, Toyama K, Goda N, Doya K, Kawato M (2004) Hierarchical Bayesian estimation for MEG inverse problem. Neuroimage 23:806–826PubMedCrossRef Sato M, Yoshioka T, Kajihara S, Toyama K, Goda N, Doya K, Kawato M (2004) Hierarchical Bayesian estimation for MEG inverse problem. Neuroimage 23:806–826PubMedCrossRef
Zurück zum Zitat Scholkopf B, Smola AJ, Williamson RC, Bartlett PL (2000) New support vector algorithms. Neural Comput 12:1207–1245PubMedCrossRef Scholkopf B, Smola AJ, Williamson RC, Bartlett PL (2000) New support vector algorithms. Neural Comput 12:1207–1245PubMedCrossRef
Zurück zum Zitat Sekihara K, Nagarajan SS, Poeppel D, Marantz A (2002) Performance of an MEG adaptive-beamformer technique in the presence of correlated neural activities: effects on signal intensity and time-course estimates. IEEE Trans Biomed Eng 49:1534–1546PubMedCrossRef Sekihara K, Nagarajan SS, Poeppel D, Marantz A (2002) Performance of an MEG adaptive-beamformer technique in the presence of correlated neural activities: effects on signal intensity and time-course estimates. IEEE Trans Biomed Eng 49:1534–1546PubMedCrossRef
Zurück zum Zitat Stam CJ, Nolte G, Daffertshofer A (2007) Phase lag index: assessment of functional connectivity from multi channel EEG and MEG with diminished bias from common sources. Hum Brain Mapp 28:1178–1193PubMedCrossRef Stam CJ, Nolte G, Daffertshofer A (2007) Phase lag index: assessment of functional connectivity from multi channel EEG and MEG with diminished bias from common sources. Hum Brain Mapp 28:1178–1193PubMedCrossRef
Zurück zum Zitat Timmermann L, Gross J, Dirks M, Volkmann J, Freund HJ, Schnitzler A (2002) The cerebral oscillatory network of parkinsonian resting tremor. Brain 126:199–212CrossRef Timmermann L, Gross J, Dirks M, Volkmann J, Freund HJ, Schnitzler A (2002) The cerebral oscillatory network of parkinsonian resting tremor. Brain 126:199–212CrossRef
Zurück zum Zitat Tipping ME (2001) Sparse bayesian learning and the relevance vector machine. J Mach Learn Res 1:211–244 Tipping ME (2001) Sparse bayesian learning and the relevance vector machine. J Mach Learn Res 1:211–244
Zurück zum Zitat Tipping ME (2004) Bayesian inference: an introduction to principles and practice in machine learning. Lecture notes in computer science, pp 41–62 Tipping ME (2004) Bayesian inference: an introduction to principles and practice in machine learning. Lecture notes in computer science, pp 41–62
Zurück zum Zitat Van Veen BD, Van Drongelen W, Yuchtman M, Suzuki A (1997) Localization of brain electrical activity via linearly constrained minimum variance spatial filtering. IEEE Trans Biomed Eng 44:867–880PubMedCrossRef Van Veen BD, Van Drongelen W, Yuchtman M, Suzuki A (1997) Localization of brain electrical activity via linearly constrained minimum variance spatial filtering. IEEE Trans Biomed Eng 44:867–880PubMedCrossRef
Zurück zum Zitat Wipf D, Nagarajan S (2007) Beamforming using the relevance vector machine. ICML '07 Proceedings of the 24th international conference on Machine learning 1023–1030 Wipf D, Nagarajan S (2007) Beamforming using the relevance vector machine. ICML '07 Proceedings of the 24th international conference on Machine learning 1023–1030
Zurück zum Zitat Wipf D, Nagarajan S (2009) A unified Bayesian framework for MEG/EEG source imaging. Neuroimage 44:947–966PubMedCrossRef Wipf D, Nagarajan S (2009) A unified Bayesian framework for MEG/EEG source imaging. Neuroimage 44:947–966PubMedCrossRef
Zurück zum Zitat Wipf D, Owen J, Attias H, Sekihara K, Nagarajan S (2010) Robust Bayesian estimation of the location, orientation, and time course of multiple correlated neural sources using MEG. Neuroimage 49:641–655PubMedCrossRef Wipf D, Owen J, Attias H, Sekihara K, Nagarajan S (2010) Robust Bayesian estimation of the location, orientation, and time course of multiple correlated neural sources using MEG. Neuroimage 49:641–655PubMedCrossRef
Zurück zum Zitat Zoltowski MD (1988) On the performance analysis of the MVDR beamformer in the presence of correlated interference. IEEE Trans Acoust Speech Signal Process 36:945–947CrossRef Zoltowski MD (1988) On the performance analysis of the MVDR beamformer in the presence of correlated interference. IEEE Trans Acoust Speech Signal Process 36:945–947CrossRef
Zurück zum Zitat Zumer JM, Attias HT, Sekihara K, Nagarajan SS (2007) A probabilistic algorithm integrating source localization and noise suppression for MEG and EEG data. Neuroimage 37:102–115PubMedCrossRef Zumer JM, Attias HT, Sekihara K, Nagarajan SS (2007) A probabilistic algorithm integrating source localization and noise suppression for MEG and EEG data. Neuroimage 37:102–115PubMedCrossRef
Metadaten
Titel
Optimal spatial filtering for brain oscillatory activity using the Relevance Vector Machine
verfasst von
P. Belardinelli
A. Jalava
J. Gross
J. Kujala
R. Salmelin
Publikationsdatum
01.11.2013
Verlag
Springer Berlin Heidelberg
Erschienen in
Cognitive Processing / Ausgabe 4/2013
Print ISSN: 1612-4782
Elektronische ISSN: 1612-4790
DOI
https://doi.org/10.1007/s10339-013-0568-y

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