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Biodiversity and Conservation

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11.03.2017 | Original Paper

Phylogeography of endangered Dendrobium moniliforme in East Asia based on mitochondrial DNA sequence variations

verfasst von: Meirong Ye, Wei Liu, Qingyun Xue, Wenjin Yan, Beiwei Hou, Jing Luo, Xiaoyu Ding

Erschienen in: Biodiversity and Conservation | Ausgabe 7/2017

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Abstract

Belonging to the genus Dendrobium of Orchidaceae, Dendrobium moniliforme is an endangered species with disjunct distribution in East Asia, possessing significant medicinal value. To investigate its phylogeography, this study compared sequences of two mitochondrial DNA (mtDNA) fragments (nad 1/b-c and nad 7/2-3) from 143 samples of 18 natural populations of D. moniliforme almost covering the entire range of the Sino-Japanese Floristic Region (SJFR) of East Asia. As a result, a total of 30 mtDNA haplotypes were identified in these populations which revealed high levels of haplotype diversity (H _d = 0.8733) and total genetic diversity (H _T = 0.8886). Additionally, G _ST value being significantly lower (0.451) than N _ST value (0.722) (P < 0.05) indicated the presence of strong phylogeographic structure in these populations, and the network of mtDNA haplotypes showed that all haplotypes were divided into two clades (A and B). Haplotype overlap was observed among several D. moniliforme population groups in mainland China, suggesting the occurrence of ongoing and/or historical gene flow among them. No common haplotypes were shared by D. moniliforme populations from mainland China and the CKJ Islands (representing Taiwan [China], South Korea, and Japan collectively), pointing to their allopatric evolution in the two regions. Moreover, mismatch distribution analysis and neutral test of mtDNA data rejected the population expansion model. According to the mtDNA-based results, we infer that multiple refugia for D. moniliforme existed in the SJFR of East Asia during the Quaternary glacial period.

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Titel: Phylogeography of endangered Dendrobium moniliforme in East Asia based on mitochondrial DNA sequence variations
verfasst von: Meirong Ye
Wei Liu
Qingyun Xue
Wenjin Yan
Beiwei Hou
Jing Luo
Xiaoyu Ding
Publikationsdatum: 11.03.2017
Verlag: Springer Netherlands
Erschienen in: Biodiversity and Conservation / Ausgabe 7/2017
Print ISSN: 0960-3115
Elektronische ISSN: 1572-9710
DOI: https://doi.org/10.1007/s10531-017-1324-x

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