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Journal of Crop Health

Erschienen in:

02.06.2023 | Review Article / Übersichtsbeitrag

Rhizosphere Microorganisms for Climate Resilient and Sustainable Crop Production

verfasst von: Pravallikasree Rayanoothala, Sk. Hasibul Alam, Sunita Mahapatra, Abdul Gafur, Sarjiya Antonius

Erschienen in: Journal of Crop Health | Ausgabe 6/2023

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Abstract

Climate change is a major threat to crop production’s sustainability in present-day agriculture. Consequently, the need for improved farming techniques and environment-responsive and climate-resilient technologies is realized as one of the top priorities. Recently, research efforts have been on the rise to develop sustainable crop production strategies by exploring the hidden potential of soil-root-microbiome to establish a sustainable food production system and maintain soil and plant health. Published literature indicated that rhizosphere-associated microbes are the prime force for governing the earth’s biogeochemical processes because of their insidious and copious existence in the soil environment. The scientific community is betrothed in extensive research to select and commercialize the microorganisms of biotechnological and environmental significance. It is well-established that microbes aid in providing ecological sustainability in the agrarian system by protecting plants from damaging pests and diseases, promoting plant development, reducing environmental and nutritional stressors, and boosting plant resilience to various abiotic and biotic stress situations. Most importantly, crop growth and yield are directly linked to rhizosphere microbiota. Therefore, attempts have been made to review and synthesize the available literature on rhizosphere microorganisms’ role in climate-resilient and sustainable crop production. Besides, a new novel and emerging strategies to deploy microbial consortia as potential bio-inoculants for rhizosphere engineering has been highlighted to improve crop yields and environmental protection that are currently in practice to combat the challenges imposed by ever-changing climate change in a sustainable and eco-compatible manner.

Vorheriger Artikel Root-Knot Nematodes (Meloidogyne spp.): Biology, Plant-Nematode Interactions and Their Environmentally Benign Management Strategies

Nächster Artikel Coping with Drought: Consequences, Responses, and Plant Growth Promoting Rhizobacteria Mediated Amelioration Mechanisms in Crop Plants

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Akhtar N, Ilyas N, Yasmin H, Sayyed RZ, Hasnain Z, Elsayed EA, Enshasy HA (2021) Role of Bacillus cereus in improving the Growth and Phytoextractability of Brassica nigra (L.) K. Koch in Chromium Contaminated Soil. Molecules 26:1569 (https://www.mdpi.com/1420-3049/26/6/1569)CrossRefPubMedPubMedCentral

Allen LH et al (1987) Response of Vegetation to Rising Carbon Dioxide: Photosynthesis, Biomass, and Seed Yield of Soybean. Global Biogeochem Cy 1:1–14. https://doi.org/10.1029/GB001i001p00001CrossRef

Allison SD, Martiny JBH (2008) Resistance, resilience, and redundancy in microbial communities. Proc Natl Acad Sci Usa 105:11512–11519. https://doi.org/10.1073/pnas.0801925105CrossRefPubMedPubMedCentral

Alori ET, Babalola OO (2018) Microbial Inoculants for Improving Crop Quality and Human Health in Africa. Front Microbiol 9:2213. https://doi.org/10.3389/fmicb.2018.02213CrossRefPubMedPubMedCentral

Ashraf M (2004) Some important physiological selection criteria for salt tolerance in plants. Flora 199:361–376. https://doi.org/10.1078/0367-2530-00165CrossRef

Backer R, Rokem JS, Ilangumaran G, Lamont J, Praslickova D, Ricci E, Subramanian S, Smith DL (2018) Plant growthpromoting rhizobacteria: context, mechanisms of action, and roadmap to commercialization of biostimulants for sustainable agriculture. Front Plant Sci 9:1473. https://doi.org/10.3389/fpls.2018.01473CrossRefPubMedPubMedCentral

Badri DV, Vivanco JM (2009) Regulation and function of root exudates. Plant Cell Environ 32:666–681. https://doi.org/10.1111/j.1365-3040.2009.01926.xCrossRefPubMed

Badri DV, Chaparro JM, Zhang R, Shen Q, Vivanco JM (2013) Application of natural blends of phytochemicals derived from the root exudates of Arabidopsis to the soil reveal that phenolic-related compounds predominantly modulate the soil microbiome. J Biol Chem 288:4502–4512. https://doi.org/10.1074/jbc.M112.433300CrossRefPubMedPubMedCentral

Bais HP, Fall R, Vivanco JM (2004) Biocontrol of Bacillus subtilis against infection of Arabidopsis roots by Pseudomonas syringae is facilitated by biofilm formation and surfactin production. Plant Physiol. 134(1):307–319. https://doi.org/10.1104/pp.103.028712CrossRefPubMedPubMedCentral

Bais HP, Weir TL, Perry LG, Gilroy S, Vivanco JM (2006) The role of root exudates in rhizosphere interactions with plants and other organisms. Annu Rev Plant Biol 57:233–266. https://doi.org/10.1146/annurev.arplant.57.032905.105159CrossRefPubMed

Bano A, Muqarab R (2017) Plant defence induced by PGPR against Spodopteralitura in tomato (Solanum lycopersicum L.). Plant Biol 19:406–412. https://doi.org/10.1111/plb.12535CrossRefPubMed

Barka AE, Nowak J, Clément C (2006) Enhancement of chilling resistance of inoculated grapevine plantlets with a plant growth-promoting rhizobacterium, Burkholderia phytofirmans strain PsJN. Appl Environ Microbiol 72(11):7246–7252. https://doi.org/10.1128/AEM.01047-06CrossRef

Bashan Y, Holguin G (1998) Proposal for the division of plant growth-promoting rhizobacteria into two classifications: biocontrol-PGPB (plant-growth-promoting bacteria) and PGPB. Soil Biology Biochemistry 30:1225–1228CrossRef

Basu A, Prasad P, Das SN, Kalam S, Sayyed RZ, Reddy MS (2021) Plant Growth Promoting Rhizobacteria (PGPR) as green bioinoculants: recent developments, constraints, and prospects. Sustainability 13:140. https://doi.org/10.3390/su13031140CrossRef

Belimov AA, Safronova VI, Sergeyeva TA, Egorova TN, Matveyeva VA, Tsyganov VE, Borisov AY, Tikhonovich IA, Kluge C, Preisfeld A, Dietz KJ, Stepanok VV (2001) Characterization of plant growth promoting rhizobacteria isolated from polluted soils and containing 1-aminocyclopropane-1-carboxylate deaminase. Can J Microbiol 47:642–652CrossRefPubMed

Bhardwaj S, Kumar P (2020) Salinity stress, its physiological response and mitigating effects of microbial bioinoculants and organic compounds. J Pharmacogn Phytochem 9:1297–1303CrossRef

Bhat BA, Tariq L, Nissar S, Islam ST, Islam SU, Mangral Z, Ilyas N, Sayyed RZ, Muthusamy G, Kim W, Dar TH (2022) Plant-associated rhizobacteria in plant growth and metabolism as a tool for sustainable agriculture. J Appl Microbiol. https://doi.org/10.1111/jam.157962022CrossRefPubMed

Bremer C, Braker G, Matthies D, Beierkuhnlein C, Conrad R (2009) Plant presence and species combination, but not diversity, influence denitrifier activity and the composition of nirK-type denitrifier communities in grassland soil. FEMS Microbiolecol 70:377–387. https://doi.org/10.1111/j.1574-6941.2009.00732.xCrossRef

Budamagunta V, Shameem N, Irusappan S, Parray JA, Thomas M, Marimuthu S, Kirubakaran R, Jothi KNA, Sayyed RZ, Lim HR (2023) Microbial nanovesicle and extracellular polymeric substances mediate nickel tolerance and remediate heavy metal ions from soil. Env Res 219(15):114997. https://doi.org/10.1016/j.envres.2022.114997CrossRef

Buysens S, Heungens K, Poppe J, Hofte M (1996) Involvement of pyochelin and pyoverdin in suppression of Pythium-induced damping-off of tomato by Pseudomonas aeruginosa 7NSK2. Appl Environ Microbiol 62:865–871. https://doi.org/10.1128/aem.62.3.865-871.1996CrossRefPubMedPubMedCentral

Cabral C, Sabine R, Ivanka T, Bernd W (2016) Arbuscular mycorrhizal fungi modify nutrient allocation and composition in wheat (Triticum aestivum L.) subjected to heat-stress. Plant Soil 408:385–399. https://doi.org/10.1007/s11104-016-2942-xCrossRef

Carlstrom CI, Field CM, Bortfeld-Miller M, Muller B, Sunagawa S, Vorholt JA (2019) Synthetic microbiota reveal priority effects and keystone strains in the Arabidopsis phyllosphere. Nat Ecol Evol 3:1445–1454. https://doi.org/10.1038/s41559-019-0994-zCrossRefPubMedPubMedCentral

Castillo P, Escalante M, Gallardo M, Alemano S, Abdala G (2013) Effects of bacterial single inoculation and co-inoculation on growth and phytohormone production of sunflower seedlings under water stress. Acta Physiol Plant 35:2299–2309. https://doi.org/10.1007/s11738-013-1267-0CrossRef

Cerda A, Rodrigo-Comino J, Giménez-Morera A, Keesstra SD (2017) An economic, perception and biophysical approach to the use of oat straw as mulch in Mediterranean rainfed agriculture land. Ecol Eng 108:162–171. https://doi.org/10.1016/j.ecoleng.2017.08.028CrossRef

Chakraborty S, Debnath D, Mahapatra S, Das S (2020) Role of endophytes in plant disease management. In: Singh KP, Jahagirdar S, Sarma BK (eds) Emerging trends in plant pathology. Springer, Singapore https://doi.org/10.1007/978-981-15-6275-4_19CrossRef

Chakraborty S, Islam T, Mahapatra S (2022) Antifungal compounds of plant growth-promoting bacillus species. In: Sayyed R, Singh A, Ilyas N (eds) Antifungal metabolites of Rhizobacteria for sustainable agriculture. Fungal biology. Springer, Cham https://doi.org/10.1007/978-3-031-04805-0_7CrossRef

Chaparro JM, Sheflin AM, Manter DK, Vivanco JM (2012) Manipulating the soil microbiome to increase soil health and plant fertility. Biol Fertil Soils 48:489–499. https://doi.org/10.1007/s00374-012-0691-4CrossRef

Chiang PN, Chiu C‑Y, Wang MK, Chen B‑T (2011) Lowmolecular-weight organic acids exuded by millet (Setariaitalica (L.) Beauv.) roots and their effect on the remediation of cadmium-contaminated soil. Soil Sci 176:33–38. https://doi.org/10.1097/SS.0b013e318202fdc9CrossRef

Cook RJ, Thomashow LS, Weller DM, Fujimoto D, Mazzola M, Bangera G, Kim DS (1995) Molecular mechanisms of defense by rhizobacteria against root disease. Proc Natl Acad Sci Usa 92:4197. https://doi.org/10.1073/pnas.92.10.4197CrossRefPubMedPubMedCentral

Cregger MA, Schadt CW, McDowell NT, Pockman WT, Classena AT (2012) Response of the soil microbial community to changes in precipitation in a semiarid ecosystem. Appl Environ Microbiol 78(24):8587–8594. https://doi.org/10.1128/AEM.02050-12CrossRefPubMedPubMedCentral

Cruz-Martinez K, Suttle KB, Brodie EL, Power ME, Andersen GL, Banfield JF (2009) Despite strong seasonal responses, soil microbial consortia are more resilient to long-term changes in rainfall than overlying grassland. ISME J 3:738–744. https://doi.org/10.1038/ismej.2009.16CrossRefPubMed

Díaz A, Smith A, Mesa P, Zapata J, Caviedes D, Cotes AM (2013) Control of Fusarium wilt in cape gooseberry by Trichoderma koningiopsis and PGPR. IOBC-WPRS Bull 86:89–94

Dixit R, Agrawal L, Gupta S, Kumar M, Yadav S, Chauhan PS (2016) Southern blight disease of tomato control by 1‑aminocyclopropane1-carboxylate (ACC) deaminase producing Paenibacilluslentimorbus B‑30488. Plant Signal Behav 11:e1113363. https://doi.org/10.1080/15592324.2015.1113363CrossRefPubMedPubMedCentral

Doring TF, Vieweger A, Pautasso M, Vaarst M, Finckhe MR, Wolfea MS (2015) Resilience as a universal criterion of health. J Sci Food Agric 95(3):455–465. https://doi.org/10.1002/jsfa.6539CrossRefPubMed

Druzhinina IS, Seidl-Seiboth V, Herrera-Estrella A (2011) Trichoderma: the genomics of opportunistic success. Nat Rev Microbiol 9:896 (https://escholarship.org/uc/item/4hc5r81s)CrossRef

Duffy BK (2001) Competition. In: Maloy OC, Murray TD (eds) Encyclopedia of Plant Pathology. John Wiley Sons, New York, pp 243–244

Dutta C, Pan A (2002) Horizontal Gene Transfer and Bacterial Diversity. Journal of Biosciences 27:27–33. https://doi.org/10.1007/BF02703681CrossRefPubMed

Finkel OM, Castrillo G, Paredes SH, González IS, Dangl JL (2017) Understanding and exploiting plant beneficial microbes. Curr Opin Plant Biol 38:155–163. https://doi.org/10.1016/j.pbi.2017.04.018CrossRefPubMedPubMedCentral

Friesen ML, Porter SS, Stark SC, von Wettberg EJ, Sachs JL, Martinez-Romero E (2011) Microbially mediated plant functional traits. Annu Rev Ecol Evol Syst 42:23–46. https://doi.org/10.1146/annurev-ecolsys-102710-145039CrossRef

Gogarten JP, Doolittle WF, Lawrence JG (2002) Prokaryotic evolution in light of gene transfer. Mol Biol Evol 19:2226–2238. https://doi.org/10.1093/oxfordjournals.molbev.a004046CrossRefPubMed

Goswami M, Deka S (2020) Plant growth-promoting Rhizobacteria—alleviators of abiotic stresses in soil: a review. Pedosphere 30:40–61. https://doi.org/10.1016/S1002-0160(19)60839-8CrossRef

Gowtham HG, Singh SB, Shilpa N, Aiyaz M, Nataraj K, Udayashankar AC, Amruthesh KN, Murali M, Poczai P, Gafur A, Almalki WH, Sayyed RZ (2022) Insight into recent progress and perspectives in improvement of antioxidant machinery upon PGPR augmentation in plants under drought stress: a review. Antioxidants 11(9):1763. https://doi.org/10.3390/antiox11091763CrossRefPubMedPubMedCentral

Grichko VP, Glick BR, Grishko VI et al (2005) Evaluation of Tomato Plants with Constitutive, Root-Specific, and Stress-Induced ACC Deaminase Gene Expression. Russ J Plant Physiol 52:359–364. https://doi.org/10.1007/s11183-005-0054-1CrossRef

Griffiths BS, Philippot L (2013) Insights into the resistance and resilience of the soil microbial community. FEMS Microbiol Rev 37:112–129. https://doi.org/10.1111/j.1574-6976.2012.00343.xCrossRefPubMed

Hadadi N, Pandey V, Chiappino-Pepe A, Morales M, Gallart-Ayala H, Mehl F et al (2020) Mechanistic insights into bacterial metabolic reprogramming from omics-integrated genome-scale models. NPJ Syst Biol Appl 6:1–11CrossRefPubMedPubMedCentral

Hamid B, Zaman M, Farooq S, Fatima S, Sayyed RZ, Baba ZA, Sheikh TA, Reddy MS, Enshasy HE, Gafur A, Suriani NL (2021) Bacterial plant biostimulants: a sustainable way towards improving growth, productivity, and health of crops. Sustainability 21(13):2856 (https://www.mdpi.com/2071-1050/13/5/2856)CrossRef

Hamilton CE, Bever JD, Labb J, Yang X, Yin H (2016) Mitigating climate change through managing constructed-microbial communities in agriculture. Agric Ecosyst Environ 216:304–308. https://doi.org/10.1016/j.agee.2015.10.006CrossRef

Han QQ, Lü XP, Bai JP, Qiao Y, Paré PW, Wang SM, Zhang JL, Wu YN, Pang XP, Xu WB, Wang ZL (2014) Beneficial soil bacterium Bacillus subtilis (GB03) augments salt tolerance of white clover. Front Plant Sci 5:525. https://doi.org/10.3389/fpls.2014.00525CrossRefPubMedPubMedCentral

Haney CH, Samuel BS, Bush J, Ausubel FM (2015) Associations with rhizosphere bacteria can confer an adaptive advantage to plants. Nat Plants 1:15051. https://doi.org/10.1038/nplants.2015.51CrossRefPubMedPubMedCentral

Hassan MK, McInroy JA, Kloepper JW (2019) The interactions of Rhizodeposits with plant growth-promoting Rhizobacteria in the Rhizosphere: a review. Agriculture 9:142. https://doi.org/10.3390/agriculture9070142CrossRef

Hassen AI, Bopape F, Sanger L (2016) Microbial inoculants as agents of growth promotion and abiotic stress tolerance in plants. In: Singh D, Singh H, Prabha R (eds) Microbial Inoculants in sustainable agricultural productivity. Springer, New Delhi, pp 23–36 https://doi.org/10.1007/978-81-322-2647-5_2CrossRef

Hodges SC (2010) Soil fertility basics. Soil science extension. North Carolina State University, Raleigh, pp 4927–4932

Horton MW, Bodenhausen N, Beilsmith K, Meng D, Muegge BD, Subramanian S, Vetter MM, Vilhj BJ, Almsson M, Nordborg GJI (2014) Genome-wide association study of Arabidopsis thaliana leaf microbial community. Nat Commun 5:1–7. https://doi.org/10.1038/ncomms6320CrossRef

Hoseini A, Salehi A, Sayyed RZ, Balouchi H, Moradi A, Piri R, Nasab BF, Poczai P, Ansari MJ, Obaid SA, Datta R (2022) Efficacy of biological agents and fillers seed coating in improving drought stress in anise. Front Plant Sci 13:955512. https://doi.org/10.3389/fpls.2022.955512CrossRefPubMedPubMedCentral

Hwang SF, Ahmed HU, Gossen BD, Kutcher HR, Brandt SA, Strelkov SE (2009) Effect of crop rotation on the soil pathogen population dynamics and canola seedling establishment. Plant Pathol J 8:106–112. https://doi.org/10.3923/ppj.2009.106.112CrossRef

Ilyas N, Mumtaz K, Akhtar N, Yasmin H, Sayyed RZ, Khan W, Enshasy HE, Dailin DJ, Elsayed EA, Ali Z (2020) Exo-polysaccharides producing bacteria for the amelioration of drought stress in wheat. Sustainability 12:8876 (https://www.mdpi.com/2071-1050/12/21/8876)CrossRef

Jabborova D, Kannepalli A, Davranov K, Narimanov A, Enakiev Y, Syed A, Elgorban AM, Bahkali AH, Wirth S, Sayyed RZ, Gafur A (2021) Co-inoculation of rhizobacteria promotes growth, yield, and nutrient contents in soybean and improves soil enzymes and nutrients under drought conditions. Sci Rep 11:22081. https://doi.org/10.1038/s41598-021-01337-9CrossRefPubMedPubMedCentral

Jabborova D, Annapurna K, Azimov A, Tyagi S, Pengani KR, Sharma S, Vikram K, Poczai P, Nasif O, Ansari MJ, Sayyed RZ (2022) Co-inoculation of biochar and Arbuscular Mycorrhizae for growth promotion and nutrient fortification in soybean under drought conditions. Front Plant Sci 13:947547. https://doi.org/10.3389/fpls.2022.947547CrossRefPubMedPubMedCentral

Jain A, Singh S, Sarma BK, Singh HB (2011) Microbial consortium mediated reprogramming of defense network in pea to enhance tolerance against Sclerotiniasclerotiorum. J App Microbiol 112:537–550. https://doi.org/10.1111/j.1365-2672.2011.05220.xCrossRef

Janos DP (2007) Plant responsiveness to mycorrhizas differs from dependence upon mycorrhizas. Mycorrhiza 17:75–91. https://doi.org/10.1007/s00572-006-0094-1CrossRefPubMed

Jones DL, Hodge A, Kuzyakov Y (2004) Plant and mycorrhizal regulation of rhizodeposition. New Phytol 163:459–480. https://doi.org/10.1111/j.1469-8137.2004.01130.xCrossRefPubMed

Jousset A, Rochat L, Lanoue A, Bonkowski M, Keel C, Scheu S (2011) Plants respond to pathogen infection by enhancing the antifungal gene expression of root-associated bacteria. Mol Plant Microbe Interact 24:352–358CrossRefPubMed

Kaestli M, Schmid M, Mayo M (2012) Out of the ground: aerial and exotic habitats of the melioidosis bacterium Burkholderia pseudomallei in grasses in Australia. Environ Microbiol 14:2058–2070. https://doi.org/10.1111/j.1462-2920.2011.02671.xCrossRefPubMed

Kalam S, Basu A, Ahmad I, Sayyed RZ, Enshasy HE, Dailin DJ, Suriani NL (2020) Recent understanding of soil Acidobacteria and their ecological significance: a critical review. Front Microbiol 11:580024. https://doi.org/10.3389/fmicb.2020.580024CrossRefPubMedPubMedCentral

Kang G, Li G, Xu W, Peng X, Han Q, Zhu Y, Guo T (2012) Proteomics reveals the effects of salicylic acid on growth and tolerance to subsequent drought stress in wheat. J Proteome Res 11:6066–6079. https://doi.org/10.1021/pr300728yCrossRefPubMed

Kapadia C, Sayyed RZ, Enshasy HEE, Vaidya H, Sharma D, Patel V, Malek RA, Syed A, Elgorban AM, Ahmad K, Zuan ATK (2021) Halotolerant microbial consortia for sustainable mitigation of salinity stress, growth promotion, and mineral uptake in tomato plant and soil nutrient enrichment. Sustainability 13:8369 (https://www.mdpi.com/2071-1050/13/15/8369)CrossRef

Katiyar V, Goel R (2003) Solubilization of inorganic phosphate and plant growth promotion by cold tolerant mutants of Pseudomonas fluorescens. Microbiol Res 158(2):163–168. https://doi.org/10.1078/0944-5013-00188CrossRefPubMed

Kaul S, Choudhary M, Gupta S, Dhar MK (2021) Engineering host microbiome for crop improvement and sustainable agriculture. Front Microbiol 12:1125CrossRef

Ke J, Wang B, Yoshikuni Y (2021) Microbiome engineering: synthetic biology of plant-associated microbiomes in sustainable agriculture. Trends Biotechnol 39:244–261CrossRefPubMed

Kessell AK, McCullough HC, Auchtung JM, Bernstein HC, Song HS (2020) Predictive interactome modeling for precision microbiome engineering. Curr Opin Chem Eng 30:77–85. https://doi.org/10.1016/j.coche.2020.08.003CrossRef

Khan I, Awan SA, Ikram R, Rizwan M, Akhtar N, Yasmin H, Sayyed RZ, Ali S, Ilyas N (2020) Effects of 24-epibrassinolide on plant growth, antioxidants defense system, and endogenous hormones in two wheat varieties under drought stress. Physiol Plant. https://doi.org/10.1111/ppl.13237CrossRefPubMed

Khandelwal S, Manwar A, Chaudhari B, Chincholkar S (2002) Siderophoregenicbradyrhizobia boost yield of soybean. Appl Biochem Biotechnol 102:155–168. https://doi.org/10.1385/ABAB:102-103:1-6:155CrossRefPubMed

Kim YC, Jung H, Kim KY, Park SK (2008) An effective biocontrol bioformulation against Phytophthora blight of pepper using growth mixtures of combined chitinolytic bacteria under different field conditions. Eur J Plant Pathol 120:373–382. https://doi.org/10.1007/s10658-007-9227-4CrossRef

Kuklinsky-Sobral J, Araujo WL, Mendes R, Geraldi IO, Pizzirani-Kleiner AA, Azevedo JL (2004) Isolation and characterization of soybean-associated bacteria and their potential for plant growth promotion. Environ Microbiol 6:1244–1251. https://doi.org/10.1111/j.1462-2920.2004.00658.xCrossRefPubMed

Kumar A, Maurya BR, Raghuwanshi R, Meena VS, Islam MT (2017) Co-Inoculation with Enterobacter and Rhizobacteria on Yield and Nutrient Uptake by Wheat (Triticum aestivum L.) in the Alluvial Soil Under Indo-Gangetic Plain of India. J Plant Growth Regul 36:608–617. https://doi.org/10.1007/s00344-016-9663-5CrossRef

Kumar A, Singh S, Mukherjee A, Rastogi RP, Verma JP (2020) Salttolerant plant growth-promoting Bacillus pumilus strain JPVS11 for enhancing plant growth attributes of rice and soil health management under salinity stress. Microbiol Res 9:126616. https://doi.org/10.1016/j.micres.2020.126616CrossRef

Kumar S, Chauhan PS, Agrawal L, Raj R, Srivastava A, Gupta S (2016) Paenibacilluslentimorbus inoculation enhances tobacco growth and extenuates the virulence of Cucumber mosaic virus. PLoS ONE 11:e149980. https://doi.org/10.1371/journal.pone.0149980CrossRefPubMedPubMedCentral

Kusale SP, Attar YC, Sayyed RZ, Malek RA, Ilyas N, Suriani NL, Khan N, Enshasy HE (2021a) Production of plant beneficial and antioxidants metabolites by Klebsiella variicola under salinity Stress. Molecules 26:1894. https://doi.org/10.3390/molecules26071894CrossRefPubMedPubMedCentral

Kusale SP, Attar YC, Sayyed RZ, Enshasy HE, Hanapi Z, Ilyas N, Elgorban AM, Bahkali AH, Marraiki N (2021b) Inoculation of Klebsiella variicola Alleviated slat stress Salinity and Improved Growth and Nutrients in Wheat and Maize. Agronomy 11:927 (https://www.mdpi.com/2073-4395/11/5/927/htm)CrossRef

Kwak MJ, Kong HG, Choi K, Kwon SK, Song JY, Lee J, Lee PA, Choi SY, Seo M, Lee HJ (2018) Rhizosphere microbiome structure alters to enable wilt resistance in tomato. Nat Biotechnol 36:1100–1109. https://doi.org/10.1038/nbt.4232CrossRef

Lambers H, Mougel C, Jaillard B, Hinsinger P (2009) Plantmicrobe-soil interactions in the rhizosphere: an evolutionary perspective. Plant Soil 321:83–115. https://doi.org/10.1007/s11104-009-0042-xCrossRef

Larsen EH, Lobinski R, Burger-Meÿer K, Hansen M, Ruzik R, Mazurowska L (2006) Uptake and speciation of selenium in garlic cultivated in soil amended with symbiotic fungi (mycorrhiza) and selenate. Anal Bioanal Chem 385:1098–1108. https://doi.org/10.1007/s00216-006-0535-xCrossRefPubMed

Lehman RM, Cambardella CA, Stott DE, Acosta-Martinez V, Manter DK, Buyer JS, Maul JE, Smith JL, Collins HP, Halvorson JJ, Kremer RJ, Lundgren JG, Ducey TF, Jin VL, Karlen DL (2015) Understanding and enhancing soil biological health: the solution for reversing soil Degradation. Sustainability 7:988–1027. https://doi.org/10.3390/su7010988CrossRef

Lim JH, Kim SD (2013) Induction of drought stress resistance by multi-functional PGPR bacillus licheniformis K11 in pepper. Plant Pathol J 29:201–208. https://doi.org/10.5423/PPJ.SI.02.2013.0021CrossRefPubMedPubMedCentral

Lucas JA, Garcia-Cristobal J, Bonilla A, Ramos B, Gutierrez-Mañero FJ (2014) Beneficial rhizobacteria from rice rhizosphere confers high protection against biotic and abiotic stress inducing systemic resistance in rice seedlings. Plant Physiol Biochem 82:44–53. https://doi.org/10.1016/j.plaphy.2014.05.007CrossRefPubMed

Lumibao CY, Bernik BM, Formel SK, Kandalepas D, Mighell KL, Pardue J et al (2020) Rhizosphere microbial communities reflect genotypic and trait variation in a salt marsh ecosystem engineer. Am J Bot 107:941–949. https://doi.org/10.1002/ajb2.1497CrossRefPubMed

Mahapatra S, Rayanoothala P, Solanki MK, Das S (2020) Wheat microbiome: present status and future perspective. In: Solanki M, Kashyap P, Kumari B (eds) Phytobiomes: current insights and future vistas. Springer, Singapore https://doi.org/10.1007/978-981-15-3151-4_8CrossRef

Mahapatra S, Chakraborty S, Rayanoothala P, Das S, Bishnoi SK, Kumar S (2022a) Antimicrobial agents for wheat disease management: mode of action and its application. In: Kashyap et al (ed) New horizons in wheat and barley research. Springer, Singapore https://doi.org/10.1007/978-981-16-4134-3_6CrossRef

Mahapatra S, Chakraborty S, Samanta M, Das S, Islam T (2022b) Current understanding and future directions of biocontrol of plant diseases by bacillus spp., with special reference to induced systemic resistance. In: Islam MT, Rahman M, Pandey P (eds) Bacilli in agrobiotechnology. Bacilli in climate resilient agriculture and bioprospecting. Springer, Cham https://doi.org/10.1007/978-3-030-85465-2_6CrossRef

Mansfield J, Genin S, Magori S, Citovsky V, Sriariyanum M, Ronald P, Dow M, Verdier V, Beer SV, Machado MA, Toth I, Salmond G, Foster GD (2012) Top 10 plant pathogenic bacteria in molecular plant pathology. Mol Plant Pathol 13(6):614–629. https://doi.org/10.1111/j.1364-3703.2012.00804.xCrossRefPubMedPubMedCentral

Martinuz A, Schouten A, Menjivar R, Sikora R (2012) Effectiveness of systemic resistance toward Aphis gossypii (Hom., Aphididae) as induced by combined applications of the endophytes Fusarium oxysporum Fo162 and Rhizobium etli G12. Biol Cont 62:206–212. https://doi.org/10.1016/j.biocontrol.2012.05.006CrossRef

Mayak S, Tirosh T, Glick BR (2004) Plant growth-promoting bacteria confer resistance in tomato plants to salt stress. Plant Physiol Biochem 42(6):565–572. https://doi.org/10.1016/j.plaphy.2004.05.009CrossRefPubMed

Mendes R, Kruijt M, de Bruijn I (2011) Deciphering the rhizosphere microbiome for disease-suppressive bacteria. Science 332:1097–1100. https://doi.org/10.1126/science.1203980CrossRefPubMed

Micallef SA, Channer S, Shiaris MP, Colon-Carmona A (2009) Plant age and genotype impact the progression of bacterial community succession in the Arabidopsis rhizosphere. Plant Signal Behav 4:777–780. https://doi.org/10.4161/psb.4.8.9229CrossRefPubMedPubMedCentral

Microbes S (2010) Understanding soil microbes and nutrient recycling. Actinomycetes 107:40–50

Milkereit J, Geisseler D, Lazicki P, Settles ML, Durbin-Johnson BP, Hodson A (2021) Interactions between nitrogen availability, bacterial communities, and nematode indicators of soil food web function in response to organic amendments. Appl Soil Ecol 157:103767. https://doi.org/10.1016/j.apsoil.2020.103767CrossRef

Mirete S, de Figueras CG, Gonzalez-Pastor JE (2007) Novel nickel resistance genes from the rhizosphere metagenome of plants adapted to acid mine drainage. Appl Environ Microbiol 73:6001–6011. https://doi.org/10.1128/AEM.00048-07CrossRefPubMedPubMedCentral

Mondal A, Mahapatra S, Chakraborty S, Debnath D, Das T, Samanta M (2021) Eco-friendly management of collar rot of lentil by introduced native Rhizobacterial candidates. Indian J Agric Res. https://doi.org/10.18805/IJARe.A-5861CrossRef

Moussa T, Almaghrabi O, Abdel-Moneim T (2013) Biological control of the wheat root rot caused by Fusarium graminearum using some PGPR strains in Saudi Arabia. Ann Appl Biol 163:72–81. https://doi.org/10.1111/aab.12034CrossRef

Mukherjee P, Mitra A, Roy M (2019) Halomonas rhizobacteria of Avicennia marina of Indian Sundarbans promote rice growth under saline and heavy metal stresses through exopolysaccharide production. Front Microbiol 10:1207. https://doi.org/10.3389/fmicb.2019.01207CrossRefPubMedPubMedCentral

Najafi S, Nasi HN, Tuncturk R, Tuncturk M, Sayyed RZ, Amirnia R (2021) Biofertilizer application enhances drought stress tolerance and alters the antioxidant enzymes in medicinal pumpkin (C.pepo convar. pepo var. Styriaca). Horticulturae 7:588 (https://www.mdpi.com/2311-7524/7/12/588/htm)CrossRef

Nelson GC, Valin H, Sands RD, Havlík P, Ahammad H, Deryng D (2014) Climate change effects on agriculture: economic responses to biophysical shocks. Proc Natl Acad Sci USA 111:3274–3279. https://doi.org/10.1073/pnas.1222465110CrossRefPubMed

Ney L, Franklin D, Mahmud K, Cabrera M, Hancock D, Habteselassie M, Newcomer Q, Fatzinger B (2019) Rebuilding soil ecosystems for improved productivity in biosolarized soils. Int J Agron. https://doi.org/10.1155/2019/5827585CrossRef

Ng L, Sariah M, Sariam O, Radziah O, Abidin MZ (2016) PGPM-induced defense-related enzymes in aerobic rice against rice leaf blast caused by Pyriculariaoryzae. Eur J Plant Pathol 145:167–175. https://doi.org/10.1007/s10658-015-0826-1CrossRef

Oldroyd GED, Downie JA (2008) Coordinating nodule morphogenesis with rhizobial infection in legumes. Annu Rev Plant Biol 59:519–546. https://doi.org/10.1146/annurev.arplant.59.032607.092839CrossRefPubMed

Papenfort K, Bassler B (2016) Quorum sensing signal–response systems in Gram-negative bacteria. Nat Rev Microbiol 14:576–588. https://doi.org/10.1038/nrmicro.2016.89CrossRefPubMedPubMedCentral

Paungfoo-Lonhienne C, Rentsch D, Robatzek S, Webb RI, Sagulenko E, Näsholm T (2010) Turning the table: plants consume microbes as a source of nutrients. Plos One 5:e11915. https://doi.org/10.1371/journal.pone.0011915CrossRefPubMedPubMedCentral

Perez IB, Brown PJ (2013) The role of ROS signaling in cross-tolerance: from model to crop. Front Plant Sci 5:754. https://doi.org/10.3389/fpls.2014.00754CrossRef

Perez-Izquierdo L, Zabal-Aguirre M, Gonzalez-Martinez SC, Buee M, Verdu M, Rincon A et al (2019) Plant intraspecific variation modulates nutrient cycling through its below ground rhizospheric microbiome. J Ecol 107:1594–1605CrossRef

Philippot L, Raaijmakers JM, Lemanceau P, van der Putten WH (2013) Going back to the roots: the microbial ecology of the rhizosphere. Nat Rev Microbiol 11:789–799. https://doi.org/10.1038/nrmicro3109CrossRefPubMed

Phillips RP, Erlitz Y, Bier R, Bernhardt ES (2008) New approach for capturing soluble root exudates in forest soils. Funct Ecol 22:990–999. https://doi.org/10.1111/j.1365-2435.2008.01495.xCrossRef

Pinton R, Varanini Z, Nannipieri P (2007) The Rhizosphere: biochemistry and organic substances at the soil-plant interface. CRC press https://doi.org/10.1201/9781420005585CrossRef

Pires ACC, Cleary DFR, Almeida A (2012) Denaturing gradient gel electrophoresis and barcoded pyrosequencing reveal unprecedented archaeal diversity in mangrove sediment and rhizosphere samples. Appl Environ Microbiol 78:5520–5528. https://doi.org/10.1128/AEM.00386-12CrossRefPubMedPubMedCentral

Polz MF, Alm EJ, Hanage WP (2013) Horizontal gene transfer and the evolution of bacterial and archaeal population structure. Trends Genet 29:170–175. https://doi.org/10.1016/j.tig.2012.12.006CrossRefPubMedPubMedCentral

Qiu Z, Egidi E, Liu H, Kaur S, Singh BK (2019) New frontiers in agriculture productivity: optimised microbial inoculants and in situ microbiome engineering. Biotechnol Adv. https://doi.org/10.1016/j.biotechadv.2019.03.010CrossRefPubMed

Raaijmakers J, Mazzola M (2012) Diversity and natural functions of antibiotics produced by beneficial and pathogenic soil bacteria. Annu Rev Phytopathol 50:403–424. https://doi.org/10.1146/annurev-phyto-081211-172908CrossRefPubMed

Rai S, Omar AF, Rehan M, Al-Turki A, Sagar A, Ilyas N, Sayyed RZ, Mirza H (2023) Crop microbiome: their role and advances in molecular and Omic techniques for the sustenance of agriculture. Planta 257:27. https://doi.org/10.1007/s00425-022-04052-5CrossRef

Rana KL, Kour D, Kaur T, Devi R, Rai PK, Singh S, Rai AK, Yadav A, Sayyed RZ, Yadav AN (2022) Endophytic nitrogen-fixing bacteria: Untapped treasurer for agricultural sustainability. J Appl Biol Biotechnol. https://doi.org/10.7324/JABB.2023.11020CrossRef

Rao GGSN, Rao AVMS, Rao VUM (2009) Trends in rainfall and temperature in rainfed India in previous century. In: Aggarwal PK (ed) Global climate change and Indian Agriculture case studies from ICAR network project. ICAR, New Delhi, pp 71–73

Rayanoothala P, Divya M, Mahapatra S, Das S (2021) Microbial Biofilm: Formation, Quorum sensing, and its applications in plant disease management. In: Emerging trends in plant pathology. Springer, p 385CrossRef

Reddy PP (2014) Plant growth promoting Rhizobacteria for horticultural crop protection. Springer India, New Delhi, 978–981CrossRef

Rima FS, Biswas S, Sarker PK, Islam MR, Seraj ZI (2018) Bacteria endemic to saline coastal belt and their ability to mitigate the effects of salt stress on rice growth and yields. Ann Microbiol 68:525–535. https://doi.org/10.1007/s13213-018-1358-7CrossRef

Rodríguez-Moreno L, Pineda M, Soukupová J, Macho AP, Beuzón CR, Barón M, Ramos C (2008) Early detection of bean infection by Pseudomonas syringae in asymptomatic leaf areas using chlorophyll fluorescence imaging. Photosynth Res 96:27–35. https://doi.org/10.1007/s11120-007-9278-6CrossRefPubMed

Roesch LFW, Fulthorpe RR, Riva A (2007) Pyrosequencing enumerates and contrasts soil microbial diversity. ISME J 1:283–290. https://doi.org/10.1038/ismej.2007.53CrossRefPubMed

Romero D, Traxler MF, Lopez D, Kolter R (2011) Antibiotics as signal molecules. Chem Rev 111:5492–5505CrossRefPubMedPubMedCentral

Rosenzweig C, Parry M (1994) Potential impact of climate change on world food supply. Nature 367:133–138. https://doi.org/10.1038/367133a0CrossRef

Rosenzweig C, Elliott J, Deryng D, Ruane AC, Müller C, Arneth A, Boote KJ, Folberth C, Glotter M, Khabarov N, Neumann K, Piontek F, Pugh TAM, Schmid E, Stehfest E, Yang H, Jones JW (2014) Assessing agricultural risks of climate change in the 21st century in a global gridded crop model intercomparison. Proc Natl Acad Sci 111(9):3268–3273. https://doi.org/10.1073/pnas.1222463110CrossRefPubMed

Rustamova N, Litao N, Bozorov K, Sayyed R, Aisa HA, Yili A (2022) Plant-associated endophytic fungi: a source of structurally diverse and bioactive natural products. Plant Cell Biotechnol Mol Biol 23(7–8):1–19 (https://www.ikppress.org/index.php/PCBMB/article/view/7454)CrossRef

Saccà ML, Caracciolo AB, Lenola MD, Grenni P (2017) Ecosystem services provided by soil microorganisms. In: al Lukacet M (ed) Soil biological communities and ecosystem resilience, sustainability in plant and crop protection. Springer, Berlin Heidelberg, pp 9–24 https://doi.org/10.1007/978-3-319-63336-7_2CrossRef

Sagar A, Sayyed RZ, Ramteke PW, Sharma S, Marraiki N, Elgorban AM, Syed A (2020) ACC deaminase and antioxidant enzymes producing halophilic Enterobacter sp. PR14 promotes the growth of rice and millets under salinity stress. Physiol Mol Biol Plants 26:1847–1854. https://doi.org/10.1007/s12298-020-00852-9CrossRefPubMedPubMedCentral

Sahu A, Bhattacharjya S, Mandal A, Thakur JK, Atoliya N, Sahu N, Manna MC, Patra AK (2018) Microbes: A sustainable approach for enhancing nutrient availability in agricultural soils. In: Meena V (ed) Role of rhizospheric microbes in soil. Springer, Singapore, pp 47–75 https://doi.org/10.1007/978-981-13-0044-8_2CrossRef

Salles JF, van Veen JA, van Elsas JD (2004) Multivariate analyses of Burkholderia species in soil: effect of crop and land use history. Appl Environ Microbiol 70:4012–4020. https://doi.org/10.1128/AEM.70.7.4012-4020.2004CrossRefPubMedPubMedCentral

Sapre S, Gontia-Mishra I, Tiwari S (2021) Plant growth-promoting Rhizobacteria ameliorates salinity stress in pea (Pisum sativum). J Plant Growth Regul. https://doi.org/10.1007/s00344-021-10329-yCrossRef

Saravanakumar D, Kavino M, Raguchander T, Subbian P, Samiyappan R (2010) Plant growth promoting bacteria enhance water stress resistance in green gram plants. Acta Physiol Plant 33:203–209. https://doi.org/10.1007/s11738-010-0539-1CrossRef

Sardans J, Peñuelas J, Rivas-Ubach A (2011) Ecological metabolomics: overview of current developments and future challenges. Chemoecology 21:191–225. https://doi.org/10.1007/s00049-011-0083-5CrossRef

Sarkar D, Rakshit A, Al-Turki A, Sayyed RZ, Datta R (2021a) Connecting bio-priming approach with integrated nutrient management for improved nutrient use efficiency in crop species. Agriculture 11:372 (https://www.mdpi.com/2077-0472/11/4/372)CrossRef

Sarkar D, Rakshit A, Al-Turki A, Sayyed RZ, Datta R (2021b) Connecting bio-priming approach with integrated nutrient management for improved nutrient use efficiency in crop species. Agriculture 11:372 (https://www.mdpi.com/2077-0472/11/4/372)CrossRef

Sarker A, Rahman W, Hossain MN, Islam T (2021) Prospect and challenges for sustainable management of climate changeassociated stresses to soil and plant health by beneficial rhizobacteria. Stress 1:200–222CrossRef

Sayyed RZ, Badgujar MD, Chincholkar SB (2005) Production of microbial iron chelators by Fluorescent Pseudomonads. Indian J Biotechnol 4:484–490

Schenk ST, Stein E, Kogel KH, Schikora A (2012) Arabidopsis growth and defense are modulated by bacterial quorum sensing molecules. Plant Signal Behav 7:178–181. https://doi.org/10.4161/psb.18789CrossRefPubMedPubMedCentral

Schnitzer SA, Klironomos JN, HilleRisLambers J (2011) Soil microbes drive the classic plant diversity-productivity pattern. Ecology 92:296–303. https://doi.org/10.1890/10-0773.1CrossRefPubMed

Schweitzer JA, Bailey JK, Fischer DG, LeRoy CJ, Lonsdorf EV, Whitham TG (2008) Plant-soil-microorganism interactions: heritable relationship between plant genotype and associated soil microorganisms. Ecology 89:773–781. https://doi.org/10.1890/07-0337.1CrossRefPubMed

Shade A, Peter H, Allison SD, Baho DL, Berga M, Bürgmann H, Huber DH, Langenheder S, Lennon JT, Martiny JBH, Matulich KL, Schmidt TM, Handelsmaner J (2012) Fundamentals of microbial community resistance and resilience. Front Microbio 3:1–16. https://doi.org/10.3389/fmicb.2012.00417CrossRef

Shaharoona B, Imran M, Arshad M, Khalid A (2011) Manipulation of ethylene synthesis in roots through bacterial ACC deaminase for improving nodulation in legumes. Crit Rev Plant Sci 30:279–291. https://doi.org/10.1080/07352689.2011.572058CrossRef

Sharaff MM, Subrahmanyam G, Kumar A, Yadav AN (2020) Mechanistic understanding of the root microbiome interaction for sustainable agriculture in polluted soils. In: New and future developments in microbial biotechnology and bioengineering. Elsevier, Amsterdam, pp 61–84 https://doi.org/10.1016/B978-0-12-820526-6.00005-1CrossRef

Sheikh T, Baba Z, Hamid B, Iqbal S, Yatoo A, Fatima S, Nabi A, Kanth R, Dar K, Hussain N, Alturki AI, Sayyed RZ (2022) Extracellular polymeric substances in psychrophilic cyanobacteria: A potential bioflocculant and carbon sink to mitigate cold stress. Biocatal Agric Biotechnol 42:102375 (https://www.sciencedirect.com/science/article/pii/S1878818122001025?via%3Dihub)CrossRef

Shi S, Condron L, Larsen S, Richardson AE, Jones E, Jiao J (2011) In situ sampling of low molecular weight organic anions from rhizosphere of radiata pine (Pinus radiata) grown in a rhizotron system. Environ Exp Bot 70:131–142. https://doi.org/10.1016/j.envexpbot.2010.08.010CrossRef

Siddikee A, Chauhan P, Anandham R, Han GH, Sa T (2010) Isolation, Characterization, and Use for Plant Growth Promotion under Salt Stress, of ACC Deaminase-Producing Halotolerant Bacteria Derived from Coastal Soil. J Microbiol Biotechnol 20:1577–1584. https://doi.org/10.4014/jmb.2017.2709.1724CrossRefPubMed

Singh S, Bainsla NK (2015) Analysis of climate change impacts and their mitigation strategies on vegetable sector in tropical islands of Andaman and Nicobar Islands, India. J Hortic 2:126. https://doi.org/10.4172/2376-0354.1000126CrossRef

Solomon D, Lehmann J, Martinez CE (2003) Sulphur K‑edge XANES spectroscopy as a tool for understanding sulphur dynamics in soil organic matter. Soil Sci Soc Am J 67:1721–1731. https://doi.org/10.2136/sssaj2003.1721CrossRef

Srivastava S, Bist V, Srivastava S, Singh PC, Trivedi PK, Asif MH (2016) Unraveling aspects of Bacillus amyloliquefaciens mediated enhanced production of rice under biotic stress of Rhizoctoniasolani. Front Plant Sci 7:587. https://doi.org/10.3389/fpls.2016.00587CrossRefPubMedPubMedCentral

Stringlis IA, Yu K, Feussner K, de Jonge R, Van Bentum S, Van Verk MC, Berendsen RL, Bakker PA, Feussner I, Pieterse CM (2018) MYB72-dependent coumarin exudation shapes root microbiome assembly to promote plant health. Proc Natl Acad Sci USA 115:E5213–E5222. https://doi.org/10.1073/pnas.1722335115CrossRefPubMedPubMedCentral

Sukmawati D, Family N, Hidayat I, Sayyed RZ, Elsayed EA, Dailin DJ, Hanapi SZ, Wadaan MA, Enshasy HE (2021) Biocontrol activity of Aureubasidium pullulans and Candida orthopsilosis isolated from Tectona grandis L. Phylloplane against Aspergillus sp. In post-harvested citrus fruit. Sustainability 13:7479. https://doi.org/10.3390/su13137479CrossRef

Suriani NL, Suprapta D, Novizar N, Parwanayoni N, Darmadi A, Dewi D, Sudatri N, Ahmad F, Sayyed RZ, Syed A, Elgorban AM, Bahkali AH, Enshasy HE, Dalin DJ (2020) A mixture of piper leaves extracts and Rhizobacteria for sustainable plant growth promotion and biocontrol of blast pathogen of organic bali rice. Sustainability 12:8490 (https://www.mdpi.com/2071-1050/12/20/8490)CrossRef

Taiz L, Zeiger E (2006) Plant physiology, 4th edn. Sinauer, Sunderland

Takishita Y, Charron JB, Smith DL (2018) Biocontrol rhizobacterium Pseudomonas sp. 23S induces systemic resistance in tomato (Solanum lycopersicum L.) against bacterial canker Clavibactermichiganensis subsp. michiganensis. Front Microbiol 9:2119. https://doi.org/10.3389/fmicb.2018.02119CrossRefPubMedPubMedCentral

Tanvere S, Akhtar N, Ilyas N, Sayyed RZ, Fitriatin BN, Parveen K, Bukhari NA (2023) Interactive effects of Pseudomonas putida and salicylic acid for mitigating drought tolerance in Canola (Brassica napus L.). Heliyon 9(3):e14193. https://doi.org/10.1016/j.heliyon.2023.e14193CrossRef

Teixeira LCRS, Peixoto RS, Cury JC, Sul WJ, Pellizari VH, Tiedje J, Rosado AS (2010) Bacterial diversity in rhizosphere soil from Antarctic vascular plants of Admiralty Bay, maritime Antarctica. ISME J 4:989–1001. https://doi.org/10.1038/ismej.2010.35CrossRefPubMed

Timmusk S, El-Daim IAA, Copolovici L, Tanilas T, Kännaste A, Behers L, Nevo E, Seisenbaeva G, Stenström E, Niinemets Ü (2014) Drought-tolerance of wheat improved by Rhizosphere bacteria from harsh environments: enhanced biomass production and reduced emissions of stress volatiles. PLoS ONE 9:e96086. https://doi.org/10.1371/journal.pone.0096086CrossRefPubMedPubMedCentral

Tirado MC, Clarke R, Jaykus LA, McQuatters-Gollop A, Frank JM (2010) Climate change and food safety: a review. Food Res Int 43:1745–1765. https://doi.org/10.1016/j.foodres.2010.07.003CrossRef

Trivedi P, Sa T (2008) Pseudomonas corrugata (NRRL B-30409) mutants increased phosphatesolubilization, organic acid production, and plant growth at lower temperatures. Curr Micro-biol 56:140–144CrossRef

Upadhyay KS, Singh DP, Saikia R (2009) Genetic Diversity of Plant Growth Promoting Rhizobacteria Isolated from Rhizospheric Soil of Wheat Under Saline Condition. Current Microbiology 59(5):489–496. https://doi.org/10.1007/s00284-009-9464-1CrossRefPubMed

Uroz S, Oger P, Morin E, Frey-Klett P (2012) Distinct ectomycorrhizospheres share similar bacterial communities as revealed by pyrosequencing-based analysis of 16S rRNA genes. Appl Environ Microbiol 78:3020–3024. https://doi.org/10.1128/AEM.06742-11CrossRefPubMedPubMedCentral

Verma P, Suman A (2018) Wheat microbiomes: ecological significances, molecular diversity and potential bioresources for sustainable agriculture. EC Microbiol 14(9):641–665

Verma A, Shameem N, Jatav HS, Sathyanarayana E, Parray JA, Poczai P, Sayyed RZ (2022) Fungal endophytes to combat biotic and abiotic stresses for climate-smart and sustainable agriculture. Front Plant Sci 13:953836. https://doi.org/10.3389/fpls.2022.953836CrossRefPubMedPubMedCentral

Voigt K, Marano AV, Gleason FH (2013) Ecological and Economical Importance of Parasitic Zoosporic True Fungi. In Kempken F (eds) Agricultural Applications. The Mycota, vol 11. Springer, Berlin, Heidelberg

Wagg C, Jansa J, Schmid B, van der Heijden MGA (2011) Belowground biodiversity effects of plant symbionts support aboveground productivity. Ecol Lett 14:1001–1009. https://doi.org/10.1111/j.1461-0248.2011.01666.xCrossRefPubMed

Wakelin SA, Macdonald LM, Rogers SL, Gregg AL, Bolger TP, Baldock JA (2008) Habitat selective factors influencing the structural composition and functional capacity of microbial communities in agricultural soils. Soil Biol Biochem 40:803–813. https://doi.org/10.1016/j.soilbio.2007.10.015CrossRef

Weinert N, Piceno Y, Ding GC (2011) PhyloChip hybridization uncovered an enormous bacterial diversity in the rhizosphere of different potato cultivars: many common and few cultivar-dependent taxa. FEMS Microbiol Ecol 75:497–506. https://doi.org/10.1111/j.1574-6941.2010.01025.xCrossRefPubMed

Weston DJ, Pelletier DA, Morrell-Falvey JL et al (2012a) Pseudomonas fluorescens induces strain-dependent and strain-independent host plant responses in defense networks, primary metabolism, photosynthesis, and fitness. Mol Plant Microbe Interact 25:765–778CrossRefPubMed

Weston LA, Ryan PR, Watt M (2012b) Mechanisms for cellular transport and release of allelochemicals from plant roots into the rhizosphere. J Exp Bot 63:3445–3454CrossRefPubMed

White PJ, Hammond JP (2008) Phosphorus nutrition of terrestrial plants. In: White PJ, Hammond JP (eds) The ecophysiology of plant-phosphorus interactions. Plant ecophysiology. Netherlands, vol 7. Springer, pp 51–81CrossRef

Wilson RL, Urbanowski ML, Stauffer GV (1995) DNA binding sites of the LysR-type regulator GcvA in the gcv and gcvA control regions of Escherichia coli. J Bacteriol 177:4940-4946CrossRefPubMedPubMedCentral

Wu G, Liu Y, Xu Y, Zhang G, Shen Q, Zhang R (2018) Exploring elicitors of the beneficial rhizobacterium Bacillus amyloliquefaciens SQR9 to induce plant systemic resistance and their interactions with plant signaling pathways. Mol Plant Microbe Interact 31(5):560–567CrossRefPubMed

Xu H, Du H, Zeng F, Song T, Peng W (2021) Diminished Rhizosphere and bulk soil microbial abundance and diversity across succession stages in Karst Area, Southwest China. Appl Soil Ecol 158:103799. https://doi.org/10.1016/j.apsoil.2020.103799CrossRef

Zhou J, Xia B, Treves DS, Wu LY, Marsh TL, O’Neill RV, Palumbo AV, Tiedje JM (2002) Spatial and resource factors influencing high microbial diversity in soil. Appl Environ Microbiol 68:326–334. https://doi.org/10.1128/AEM.68.1.326-334.2002CrossRefPubMedPubMedCentral

Zhou K, Qiao K, Edgar S, Stephanopoulos G (2015) Distributing a metabolic pathway among a microbial consortium enhances production of natural products. Nat Biotechnol 33:377. https://doi.org/10.1038/nbt.3095CrossRefPubMedPubMedCentral

Titel: Rhizosphere Microorganisms for Climate Resilient and Sustainable Crop Production
verfasst von: Pravallikasree Rayanoothala
Sk. Hasibul Alam
Sunita Mahapatra
Abdul Gafur
Sarjiya Antonius
Publikationsdatum: 02.06.2023
Verlag: Springer Berlin Heidelberg
Erschienen in: Journal of Crop Health / Ausgabe 6/2023
Print ISSN: 2948-264X
Elektronische ISSN: 2948-2658
DOI: https://doi.org/10.1007/s10343-023-00895-4

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