Skip to main content
Erschienen in: Arabian Journal for Science and Engineering 8/2022

10.01.2022 | Research Article-Computer Engineering and Computer Science

Prostate Segmentation via Dynamic Fusion Model

verfasst von: Hakan Ocal, Necaattin Barisci

Erschienen in: Arabian Journal for Science and Engineering | Ausgabe 8/2022

Einloggen

Aktivieren Sie unsere intelligente Suche, um passende Fachinhalte oder Patente zu finden.

search-config
loading …

Abstract

Nowadays, many different methods are used in diagnosing prostate cancer. Among these methods, MRI-based imaging methods provide more precise information than other methods by obtaining the prostate's image from different angles (axial, sagittal, coronal). However, manually segmenting these images is very time-consuming and laborious. Besides, another challenge is the inhomogeneous and inconsistent appearance around the prostate borders, which is essential for cancer diagnosis. Nowadays, scientists are working intensively on deep learning-based techniques to identify prostate boundaries more efficiently and with high accuracy. In this study, a dynamic fusion architecture is proposed. For the fusion model, the Unet + Resnet3D and Unet + Resnet2D models were fused. Evaluation experiments were performed on the MICCAI 2012 Prostate Segmentation Challenge Dataset (PROMISE12) and the NCI-ISBI 2013(NCI_ISBI-13) Prostate Segmentation Challenge Dataset. Comparative analyzes show that the advantages and robustness of our method are superior to state-of-the-art approaches.

Sie haben noch keine Lizenz? Dann Informieren Sie sich jetzt über unsere Produkte:

Springer Professional "Wirtschaft+Technik"

Online-Abonnement

Mit Springer Professional "Wirtschaft+Technik" erhalten Sie Zugriff auf:

  • über 102.000 Bücher
  • über 537 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Finance + Banking
  • Management + Führung
  • Marketing + Vertrieb
  • Maschinenbau + Werkstoffe
  • Versicherung + Risiko

Jetzt Wissensvorsprung sichern!

Springer Professional "Technik"

Online-Abonnement

Mit Springer Professional "Technik" erhalten Sie Zugriff auf:

  • über 67.000 Bücher
  • über 390 Zeitschriften

aus folgenden Fachgebieten:

  • Automobil + Motoren
  • Bauwesen + Immobilien
  • Business IT + Informatik
  • Elektrotechnik + Elektronik
  • Energie + Nachhaltigkeit
  • Maschinenbau + Werkstoffe




 

Jetzt Wissensvorsprung sichern!

Literatur
13.
Zurück zum Zitat Cheng, R.; Lay, N.; Mertan, F.; Turkbey, B.; Roth, H.R.; Lu, L.; Gandler, W.; McCreedy, E.S. et al.: Deep learning with orthogonal volumetric HED segmentation and 3D surface reconstruction model of prostate MRI. In: 2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017), pp. 749–753 (2017). https://doi.org/10.1109/ISBI.2017.7950627 Cheng, R.; Lay, N.; Mertan, F.; Turkbey, B.; Roth, H.R.; Lu, L.; Gandler, W.; McCreedy, E.S. et al.: Deep learning with orthogonal volumetric HED segmentation and 3D surface reconstruction model of prostate MRI. In: 2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017), pp. 749–753 (2017). https://​doi.​org/​10.​1109/​ISBI.​2017.​7950627
15.
Zurück zum Zitat Yu, L.; Yang, X.; Chen, H.; Qin, J.; Heng, P.A.: Volumetric ConvNetswith mixed residual connections for automated prostate segmentation from 3D MR images. In: Thirty-First AAAI Conference on Artificial Intelligence (AAAI), pp. 66–72 (2017) Yu, L.; Yang, X.; Chen, H.; Qin, J.; Heng, P.A.: Volumetric ConvNetswith mixed residual connections for automated prostate segmentation from 3D MR images. In: Thirty-First AAAI Conference on Artificial Intelligence (AAAI), pp. 66–72 (2017)
19.
Zurück zum Zitat Brosch, T.; Peters, J.; Groth, A.; Stehle, T.; Weese J.: Deep learning-based boundary detection for model-based segmentation with application to MR prostate segmentation. in: Medical Image Computing and Computer-Assisted Intervention (MICCAI), pp. 515–522 (2018). https://doi.org/10.1007/978-3-030-00937-3_59 Brosch, T.; Peters, J.; Groth, A.; Stehle, T.; Weese J.: Deep learning-based boundary detection for model-based segmentation with application to MR prostate segmentation. in: Medical Image Computing and Computer-Assisted Intervention (MICCAI), pp. 515–522 (2018). https://​doi.​org/​10.​1007/​978-3-030-00937-3_​59
20.
Zurück zum Zitat Meyer, A.; Mehrtash, A.; Rak, M.; Schindele, D.; Schostak, M.; Tempany, C. et al.: Automatic high-resolution segmentation of the prostate from multi-planar MRI. 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018), pp. 177–181 (2018). https://doi.org/10.1109/ISBI.2018.8363549 Meyer, A.; Mehrtash, A.; Rak, M.; Schindele, D.; Schostak, M.; Tempany, C. et al.: Automatic high-resolution segmentation of the prostate from multi-planar MRI. 2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018), pp. 177–181 (2018). https://​doi.​org/​10.​1109/​ISBI.​2018.​8363549
26.
Zurück zum Zitat Ioffe, S.; Szegedy, C.: Batch normalization: accelerating deep network training by reducing internal covariate shift (2015). arXiv preprint arXiv:1502.03167 Ioffe, S.; Szegedy, C.: Batch normalization: accelerating deep network training by reducing internal covariate shift (2015). arXiv preprint arXiv:​1502.​03167
27.
Zurück zum Zitat Glorot, X.; Bengio, Y.: Understanding the difficulty of training deep feedforward neural networks. In Aistats 9, 249–256 (2010) Glorot, X.; Bengio, Y.: Understanding the difficulty of training deep feedforward neural networks. In Aistats 9, 249–256 (2010)
28.
Zurück zum Zitat Kingma, D.P.; Ba, J.: Adam: a method for stochastic optimization. In: International Conference on Learning Representations (ICLR), pp. 1–11 (2015) Kingma, D.P.; Ba, J.: Adam: a method for stochastic optimization. In: International Conference on Learning Representations (ICLR), pp. 1–11 (2015)
29.
Zurück zum Zitat Zhu, Q.; Du, B.; Yan, P.: Boundary-weighted domain adaptive neural network for prostate MR image segmentation. IEEE Trans. Med. Imaging (TMI) 1–11 (2019) Zhu, Q.; Du, B.; Yan, P.: Boundary-weighted domain adaptive neural network for prostate MR image segmentation. IEEE Trans. Med. Imaging (TMI) 1–11 (2019)
31.
Zurück zum Zitat Wang, P.; Chung, A.C.S.: Focal dice loss and image dilation for brain tumor segmentation, in: International Workshop on Deep Learning in Medical Image Analysis, pp. 119–127 (2018) Wang, P.; Chung, A.C.S.: Focal dice loss and image dilation for brain tumor segmentation, in: International Workshop on Deep Learning in Medical Image Analysis, pp. 119–127 (2018)
32.
Zurück zum Zitat Abraham, N.; Khan, N.M.: A novel focal Tversky loss function with improved attention U-net for lesion segmentation. In: 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019), IEEE, pp. 683–687 Abraham, N.; Khan, N.M.: A novel focal Tversky loss function with improved attention U-net for lesion segmentation. In: 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019), IEEE, pp. 683–687
34.
Zurück zum Zitat Milletari, F.; Navab, N.; Ahmadi, S.A.: V-net: fully convolutional neural networks for volumetric medical image segmentation. in: International Conference on 3D Vision (3DV), pp. 565–571 (2016) Milletari, F.; Navab, N.; Ahmadi, S.A.: V-net: fully convolutional neural networks for volumetric medical image segmentation. in: International Conference on 3D Vision (3DV), pp. 565–571 (2016)
35.
Zurück zum Zitat Drozdzal, M.; Chartrand, G.; Vorontsov, E.; Shakeri, M.; Jorio, L.D.; Tang, A.; Romero, A.; Bengio, Y.; Pal, C.; Kadoury, S.: Learning normalized inputs for iterative estimation in medical image segmentation. Med. Image Anal. 44, 1–13 (2018)CrossRef Drozdzal, M.; Chartrand, G.; Vorontsov, E.; Shakeri, M.; Jorio, L.D.; Tang, A.; Romero, A.; Bengio, Y.; Pal, C.; Kadoury, S.: Learning normalized inputs for iterative estimation in medical image segmentation. Med. Image Anal. 44, 1–13 (2018)CrossRef
37.
Zurück zum Zitat Jia, H.; Song, Y.; Huang, H.; Cai, W.; Xia, Y.: HD-Net: Hybrid Discriminative Network for Prostate Segmentation in MR Images. In: Shen D. et al. (ed.) Medical Image Computing and Computer-Assisted Intervention – MICCAI 2019. MICCAI 2019. 2019. Lecture Notes in Computer Science, vol 11765. Springer, Cham. https://doi.org/10.1007/978-3-030-32245-8_13 Jia, H.; Song, Y.; Huang, H.; Cai, W.; Xia, Y.: HD-Net: Hybrid Discriminative Network for Prostate Segmentation in MR Images. In: Shen D. et al. (ed.) Medical Image Computing and Computer-Assisted Intervention – MICCAI 2019. MICCAI 2019. 2019. Lecture Notes in Computer Science, vol 11765. Springer, Cham. https://​doi.​org/​10.​1007/​978-3-030-32245-8_​13
38.
Zurück zum Zitat Peng, C.; Zhang, X.; Yu, G.; Luo, G.; Sun, J.: Large kernel matters – improve semantic segmentation by global convolutional network. In: IEEE Conference on Computer Vision and Pattern Recognition (CVPR), pp.1743–1751 (2017) Peng, C.; Zhang, X.; Yu, G.; Luo, G.; Sun, J.: Large kernel matters – improve semantic segmentation by global convolutional network. In: IEEE Conference on Computer Vision and Pattern Recognition (CVPR), pp.1743–1751 (2017)
39.
Metadaten
Titel
Prostate Segmentation via Dynamic Fusion Model
verfasst von
Hakan Ocal
Necaattin Barisci
Publikationsdatum
10.01.2022
Verlag
Springer Berlin Heidelberg
Erschienen in
Arabian Journal for Science and Engineering / Ausgabe 8/2022
Print ISSN: 2193-567X
Elektronische ISSN: 2191-4281
DOI
https://doi.org/10.1007/s13369-021-06502-w

Weitere Artikel der Ausgabe 8/2022

Arabian Journal for Science and Engineering 8/2022 Zur Ausgabe

Research Article-Computer Engineering and Computer Science

Arabic Fake News Detection Based on Textual Analysis

Research Article-Computer Engineering and Computer Science

Latent Semantic Indexing-Based Hybrid Collaborative Filtering for Recommender Systems

    Marktübersichten

    Die im Laufe eines Jahres in der „adhäsion“ veröffentlichten Marktübersichten helfen Anwendern verschiedenster Branchen, sich einen gezielten Überblick über Lieferantenangebote zu verschaffen.