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Erschienen in: Microsystem Technologies 4/2012

01.04.2012 | Technical Paper

Laser fabrication of micropores and their integration to microfluidic platforms for DNA electrophoresis

verfasst von: B. Lerner, M. S. Perez, P. A. Kler, C. L. A. Berli, A. F. Ordoñez Arias, F. Sacco, C. Toro, C. A. Rinaldi

Erschienen in: Microsystem Technologies | Ausgabe 4/2012

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Abstract

The work presents an alternative method for the manufacture of micropores by using the combination of laser ablation and wet etching. The process of laser ablation was done on silicon (Si) wafers with silicon nitride (Si3N4) used as a sacrificial layer. The size of the pores was carefully controlled by following an optical technique. The method exhibits a series of advantages in relation micromachining techniques previously used. The fabricated pores were then integrated to polydimethylsiloxane (PDMS) microchannels, which constitutes a novel setup to be considered for microfluidic applications. Furthermore, as the system is addressed to study the electrically-driven transport of macromolecules, deoxyribonucleic acid (DNA) electrophoresis was performed in the fabricated microsystems to prove the principle. Also for these purposes, the electric field throughout the microchannel and pore region was studied in details by using numerical simulations.

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Literatur
Zurück zum Zitat Bassous E (1978) Fabrication of novel three-dimensional microstructures by the anisotropic etching of (100) and (110) silicon. IEEE Trans Electron Devices 25(10):1178–1185CrossRef Bassous E (1978) Fabrication of novel three-dimensional microstructures by the anisotropic etching of (100) and (110) silicon. IEEE Trans Electron Devices 25(10):1178–1185CrossRef
Zurück zum Zitat Chen Z, Jiang Y, Dunphy DR, Adams DP, Hodges C, Liu N, Zhang N, Xomeritakis G, Jin X, Aluru N (2010) DNA translocation through an array of kinked nanopores. Nat Mater 9(8):667–675CrossRef Chen Z, Jiang Y, Dunphy DR, Adams DP, Hodges C, Liu N, Zhang N, Xomeritakis G, Jin X, Aluru N (2010) DNA translocation through an array of kinked nanopores. Nat Mater 9(8):667–675CrossRef
Zurück zum Zitat Dudley ME, Kolasinski KW (2008) Wet etching of pillar-covered silicon surfaces: formation of crystallographically defined macropores. J Electrochem Soc 155:H164CrossRef Dudley ME, Kolasinski KW (2008) Wet etching of pillar-covered silicon surfaces: formation of crystallographically defined macropores. J Electrochem Soc 155:H164CrossRef
Zurück zum Zitat Fologea D, Gershow M, Ledden B, McNabb DS, Golovchenko JA, Li J (2005a) Detecting single stranded DNA with a solid state nanopore. Nano Lett 5(10):1905–1909. doi:10.1021/nl051199m CrossRef Fologea D, Gershow M, Ledden B, McNabb DS, Golovchenko JA, Li J (2005a) Detecting single stranded DNA with a solid state nanopore. Nano Lett 5(10):1905–1909. doi:10.​1021/​nl051199m CrossRef
Zurück zum Zitat Fologea D, Brandin E, Uplinger J, Branton D, Li J (2007a) DNA conformation and base number simultaneously determined in a nanopore. Electrophoresis 28(18):3186–3192CrossRef Fologea D, Brandin E, Uplinger J, Branton D, Li J (2007a) DNA conformation and base number simultaneously determined in a nanopore. Electrophoresis 28(18):3186–3192CrossRef
Zurück zum Zitat Fologea D, Ledden B, McNabb DS, Li J (2007b) Electrical characterization of protein molecules by a solid-state nanopore. Appl Phys Lett 91:053901CrossRef Fologea D, Ledden B, McNabb DS, Li J (2007b) Electrical characterization of protein molecules by a solid-state nanopore. Appl Phys Lett 91:053901CrossRef
Zurück zum Zitat Gierhart BC, Howitt DG, Chen SJ, Zhu Z, Kotecki DE, Smith RL, Collins SD (2008) Nanopore with transverse nanoelectrodes for electrical characterization and sequencing of DNA. Sens Actuators B Chem 132(2):593–600CrossRef Gierhart BC, Howitt DG, Chen SJ, Zhu Z, Kotecki DE, Smith RL, Collins SD (2008) Nanopore with transverse nanoelectrodes for electrical characterization and sequencing of DNA. Sens Actuators B Chem 132(2):593–600CrossRef
Zurück zum Zitat Heng JB, Ho C, Kim T, Timp R, Aksimentiev A, Grinkova YV, Sligar S, Schulten K, Timp G (2004) Sizing DNA using a nanometer–diameter pore. Biophys J 87(4):2905–2911CrossRef Heng JB, Ho C, Kim T, Timp R, Aksimentiev A, Grinkova YV, Sligar S, Schulten K, Timp G (2004) Sizing DNA using a nanometer–diameter pore. Biophys J 87(4):2905–2911CrossRef
Zurück zum Zitat Keyser UF (2011) Controlling molecular transport through nanopores. J Royal Soc Interface 8(63):1369–1378CrossRef Keyser UF (2011) Controlling molecular transport through nanopores. J Royal Soc Interface 8(63):1369–1378CrossRef
Zurück zum Zitat Kim YR, Min J, Lee IH, Kim S, Kim AG, Kim K, Namkoong K, Ko C (2007) Nanopore sensor for fast label-free detection of short double-stranded DNAs. Biosens Bioelectron 22(12):2926–2931CrossRef Kim YR, Min J, Lee IH, Kim S, Kim AG, Kim K, Namkoong K, Ko C (2007) Nanopore sensor for fast label-free detection of short double-stranded DNAs. Biosens Bioelectron 22(12):2926–2931CrossRef
Zurück zum Zitat Kler PA, Berli CLA, Guarnieri FA (2010) Modeling and high performance simulation of electrophoretic techniques in microfluidic chips. Microfluid Nanofluid 10(1):187–198CrossRef Kler PA, Berli CLA, Guarnieri FA (2010) Modeling and high performance simulation of electrophoretic techniques in microfluidic chips. Microfluid Nanofluid 10(1):187–198CrossRef
Zurück zum Zitat Lagerqvist J, Zwolak M, Di Ventra M (2006) Fast DNA sequencing via transverse electronic transport. Nano Lett 6(4):779–782CrossRef Lagerqvist J, Zwolak M, Di Ventra M (2006) Fast DNA sequencing via transverse electronic transport. Nano Lett 6(4):779–782CrossRef
Zurück zum Zitat Lan WJ, Holden DA, Zhang B, White HS (2011) Nanoparticle transport in conical-shaped nanopores. Anal Chem 83(10):3840–3847CrossRef Lan WJ, Holden DA, Zhang B, White HS (2011) Nanoparticle transport in conical-shaped nanopores. Anal Chem 83(10):3840–3847CrossRef
Zurück zum Zitat Li D (2004) Electrokinetics in microfluidics, vol 2. Elsevier Academic Press, London Li D (2004) Electrokinetics in microfluidics, vol 2. Elsevier Academic Press, London
Zurück zum Zitat Li J, Gershow M, Stein D, Brandin E, Golovchenko J (2003) DNA molecules and configurations in a solid-state nanopore microscope. Nat Mater 2(9):611–615CrossRef Li J, Gershow M, Stein D, Brandin E, Golovchenko J (2003) DNA molecules and configurations in a solid-state nanopore microscope. Nat Mater 2(9):611–615CrossRef
Zurück zum Zitat Park SR, Peng H, Ling XS (2007) Fabrication of nanopores in silicon chips using feedback chemical etching. Small 3(1):116–119CrossRef Park SR, Peng H, Ling XS (2007) Fabrication of nanopores in silicon chips using feedback chemical etching. Small 3(1):116–119CrossRef
Zurück zum Zitat Stellwagen NC, Stellwagen E (2009) Effect of the matrix on DNA electrophoretic mobility. J Chromatogr A 1216(10):1917–1929CrossRef Stellwagen NC, Stellwagen E (2009) Effect of the matrix on DNA electrophoretic mobility. J Chromatogr A 1216(10):1917–1929CrossRef
Zurück zum Zitat Storm AJ, Storm C, Chen J, Zandbergen H, Joanny JF, Dekker C (2005) Fast DNA translocation through a solid-state nanopore. Nano Lett 5(7):1193–1197CrossRef Storm AJ, Storm C, Chen J, Zandbergen H, Joanny JF, Dekker C (2005) Fast DNA translocation through a solid-state nanopore. Nano Lett 5(7):1193–1197CrossRef
Zurück zum Zitat Tabeling P (2005) Introduction to microfluidics. Oxford University Press, USA Tabeling P (2005) Introduction to microfluidics. Oxford University Press, USA
Zurück zum Zitat Toro C, Lerner B, Perez MS, Lasorsa C, Rinaldi C, Boselli A, Lamagna A (2011) A new combined method to make microcavities in silicon wafer (100). In: Proceedings of LPM2011—the 12th international symposium on laser precision microfabrication, Japan Toro C, Lerner B, Perez MS, Lasorsa C, Rinaldi C, Boselli A, Lamagna A (2011) A new combined method to make microcavities in silicon wafer (100). In: Proceedings of LPM2011—the 12th international symposium on laser precision microfabrication, Japan
Metadaten
Titel
Laser fabrication of micropores and their integration to microfluidic platforms for DNA electrophoresis
verfasst von
B. Lerner
M. S. Perez
P. A. Kler
C. L. A. Berli
A. F. Ordoñez Arias
F. Sacco
C. Toro
C. A. Rinaldi
Publikationsdatum
01.04.2012
Verlag
Springer-Verlag
Erschienen in
Microsystem Technologies / Ausgabe 4/2012
Print ISSN: 0946-7076
Elektronische ISSN: 1432-1858
DOI
https://doi.org/10.1007/s00542-011-1407-7

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