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2020 | OriginalPaper | Buchkapitel

10. Functional Diversity of Plant Endophytes and Their Role in Assisted Phytoremediation

verfasst von : Angélica Leonor Guerrero-Zúñiga, Eugenia López-López, Aída Verónica Rodríguez-Tovar, Angélica Rodríguez-Dorantes

Erschienen in: Bioremediation of Industrial Waste for Environmental Safety

Verlag: Springer Singapore

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Abstract

The functional diversity term helps to understand the biological complexity through the wide range of interactions that organisms show on communities and ecosystems as they may interact. In a particular manner, organisms may have attributes or characteristics that define their role within the ecosystems. The purpose of this review is to analyze the importance of plant growth-promoting traits of endophyte bacteria that define the functional diversity of them in their relationships with plants in assisted phytoremediation techniques.

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Literatur
Zurück zum Zitat Ahmad F, Ahmad I, Khan MS (2008) Screening of free-living rhizospheric bacteria for their multiple plant growth promoting activities. Microbiol Res 163:173–181CrossRef Ahmad F, Ahmad I, Khan MS (2008) Screening of free-living rhizospheric bacteria for their multiple plant growth promoting activities. Microbiol Res 163:173–181CrossRef
Zurück zum Zitat Atlas RM, Bartha R (1993) Microbial ecology fundamentals and applications, 3rd edn. Benjamin Cummings Publishing, New York Atlas RM, Bartha R (1993) Microbial ecology fundamentals and applications, 3rd edn. Benjamin Cummings Publishing, New York
Zurück zum Zitat Babu AG, Shea PJ, Sudhakar D, Jung IB, Oh BT (2015) Potential use of Pseudomonas koreensis AGB-1 in association with Miscanthus sinensis to remediate heavy metal(loid)-contaminated mining site soil. J Environ Manag 151:160–166CrossRef Babu AG, Shea PJ, Sudhakar D, Jung IB, Oh BT (2015) Potential use of Pseudomonas koreensis AGB-1 in association with Miscanthus sinensis to remediate heavy metal(loid)-contaminated mining site soil. J Environ Manag 151:160–166CrossRef
Zurück zum Zitat Bano N, Musarrat J (2003) Characterization of a new Pseudomonas aeruginosa strain NJ-15 as a potential biocontrol agent. Curr Microbiol l46:324–328CrossRef Bano N, Musarrat J (2003) Characterization of a new Pseudomonas aeruginosa strain NJ-15 as a potential biocontrol agent. Curr Microbiol l46:324–328CrossRef
Zurück zum Zitat Barea JM, Pozo M, Azcón R, Azcón-Aguilar C (2005) Microbial co-operation in the rhizosphere. J Exp Bot 56:1761–1778CrossRef Barea JM, Pozo M, Azcón R, Azcón-Aguilar C (2005) Microbial co-operation in the rhizosphere. J Exp Bot 56:1761–1778CrossRef
Zurück zum Zitat Becerra-Castro C, Monterroso C, Prieto-Fernández A, Rodríguez-Lamas L, Loureiro-Viñas M, Acea MJ, Kidd PS (2012) Pseudometallophytes colonizing Pb/Zn mine tailings: a description of the plant-microorganism-rhizosphere soil system and isolation of metal-tolerant bacteria. J Hazard Mater 217–218:350–359CrossRef Becerra-Castro C, Monterroso C, Prieto-Fernández A, Rodríguez-Lamas L, Loureiro-Viñas M, Acea MJ, Kidd PS (2012) Pseudometallophytes colonizing Pb/Zn mine tailings: a description of the plant-microorganism-rhizosphere soil system and isolation of metal-tolerant bacteria. J Hazard Mater 217–218:350–359CrossRef
Zurück zum Zitat Becerra-Castro C, Kidd P, Kuffner M, Prieto-Fernández A, Hann S, Monterroso C, Sessitsch A, Wenzel A, Puschenreiter M (2013) Bacterially induced weathering of ultramafic rock and its implications for phytoextraction. Appl Environ Microbiol 79:5094–5103CrossRef Becerra-Castro C, Kidd P, Kuffner M, Prieto-Fernández A, Hann S, Monterroso C, Sessitsch A, Wenzel A, Puschenreiter M (2013) Bacterially induced weathering of ultramafic rock and its implications for phytoextraction. Appl Environ Microbiol 79:5094–5103CrossRef
Zurück zum Zitat Boruvka L, Vacek O, Jehlicka J (2005) Principal component analysis as a tool to indicate the origin of potentially toxic elements in soils. Geoderma 128:289–300CrossRef Boruvka L, Vacek O, Jehlicka J (2005) Principal component analysis as a tool to indicate the origin of potentially toxic elements in soils. Geoderma 128:289–300CrossRef
Zurück zum Zitat Botta-Dukát Z (2005) Rao’s quadratic entropy as a measure of functional diversity based on multiple traits. J Veg Sci 16:533–540CrossRef Botta-Dukát Z (2005) Rao’s quadratic entropy as a measure of functional diversity based on multiple traits. J Veg Sci 16:533–540CrossRef
Zurück zum Zitat Cabello-Conejo MI, Becerra-Castro C, Prieto-Fernández A, Monterroso C, Saavedra-Ferro A, Mench M, Kidd PS (2014) Rhizobacterial inoculants can improve nickel phytoextraction by the hyperaccumulator Alyssum pintodasilvae. Plant Soil 379:35–50CrossRef Cabello-Conejo MI, Becerra-Castro C, Prieto-Fernández A, Monterroso C, Saavedra-Ferro A, Mench M, Kidd PS (2014) Rhizobacterial inoculants can improve nickel phytoextraction by the hyperaccumulator Alyssum pintodasilvae. Plant Soil 379:35–50CrossRef
Zurück zum Zitat Cattelan AJ, Hartel PG, Furhmann FF (1999) Screening for plant growth promoting rhizobacteria to promote early soybean growth. Soil Sci Soc Am J 63:1670–1680CrossRef Cattelan AJ, Hartel PG, Furhmann FF (1999) Screening for plant growth promoting rhizobacteria to promote early soybean growth. Soil Sci Soc Am J 63:1670–1680CrossRef
Zurück zum Zitat Cederlund H, Thierfelder T, Stenströma J (2008) Functional microbial diversity of the railway track bed. Sci Total Environ 397:205–214CrossRef Cederlund H, Thierfelder T, Stenströma J (2008) Functional microbial diversity of the railway track bed. Sci Total Environ 397:205–214CrossRef
Zurück zum Zitat Chapin FSI, Bret-Harte MS, Hobbie SE, Hailan Z (1996) Plant functional types as predictors of transient responses of arctic vegetation to global change. J Veg Sci 7:347–358CrossRef Chapin FSI, Bret-Harte MS, Hobbie SE, Hailan Z (1996) Plant functional types as predictors of transient responses of arctic vegetation to global change. J Veg Sci 7:347–358CrossRef
Zurück zum Zitat Charudattan R (1991) The mycoherbicide approach with plant pathogens. In: Te Beast DO (ed) Microbial control of weeds. Chapman and Hall, New York, pp 24–57CrossRef Charudattan R (1991) The mycoherbicide approach with plant pathogens. In: Te Beast DO (ed) Microbial control of weeds. Chapman and Hall, New York, pp 24–57CrossRef
Zurück zum Zitat Chen L, Luo SL, Li XJ, Wan Y, Chen JL, Liu CB (2014) Interaction of Cd hyperaccumulator Solanum nigrum L. and functional endophyte Pseudomonas sp. Lk9 on soil heavy metals uptake. Soil Biol Biochem 68:300–308CrossRef Chen L, Luo SL, Li XJ, Wan Y, Chen JL, Liu CB (2014) Interaction of Cd hyperaccumulator Solanum nigrum L. and functional endophyte Pseudomonas sp. Lk9 on soil heavy metals uptake. Soil Biol Biochem 68:300–308CrossRef
Zurück zum Zitat Compant S, Clément C, Sessitsch A (2010) Plant growth-promoting bacteria in therhizo- and endosphere of plants: their role, colonization, mechanisms involved and prospects for utilization. Soil Biol Biochem 42:669–678CrossRef Compant S, Clément C, Sessitsch A (2010) Plant growth-promoting bacteria in therhizo- and endosphere of plants: their role, colonization, mechanisms involved and prospects for utilization. Soil Biol Biochem 42:669–678CrossRef
Zurück zum Zitat Dharni S, Srivastava AK, Samad A, Patra DD (2014) Impact of plant growth promoting Pseudomonas monteilii PsF84 and Pseudomonas plecoglossicidas F610 on metal uptake and production of secondary metabolite (monoterpenes) by rose-scented geranium (Pelargonium graveolens cv. bourbon) grown on tannery sludge amended soil. Chemosphere 117:433–439CrossRef Dharni S, Srivastava AK, Samad A, Patra DD (2014) Impact of plant growth promoting Pseudomonas monteilii PsF84 and Pseudomonas plecoglossicidas F610 on metal uptake and production of secondary metabolite (monoterpenes) by rose-scented geranium (Pelargonium graveolens cv. bourbon) grown on tannery sludge amended soil. Chemosphere 117:433–439CrossRef
Zurück zum Zitat Díaz S, Cabido M (1997) Plant functional types and ecosystem function in relation to global change. J Veg Sci 8:463–474CrossRef Díaz S, Cabido M (1997) Plant functional types and ecosystem function in relation to global change. J Veg Sci 8:463–474CrossRef
Zurück zum Zitat Flaishman MA, Eyal Z, Zilberstein A, Voisard C, Hass D (1996) Suppression of Septoria tritici blotch and leaf rust of wheat by recombinant cyanide-producing strains of Pseudomonas putida. Mol Plant-Microbe Interact 9:642–645CrossRef Flaishman MA, Eyal Z, Zilberstein A, Voisard C, Hass D (1996) Suppression of Septoria tritici blotch and leaf rust of wheat by recombinant cyanide-producing strains of Pseudomonas putida. Mol Plant-Microbe Interact 9:642–645CrossRef
Zurück zum Zitat Fonseca CR, Ganade G (2001) Species functional redundancy, random extinctions and the stability of ecosystems. J Ecol 89:118–125CrossRef Fonseca CR, Ganade G (2001) Species functional redundancy, random extinctions and the stability of ecosystems. J Ecol 89:118–125CrossRef
Zurück zum Zitat Frankenberger WT Jr, Arshad M (1995) Phytohormones in soil: microbial production and function. Marcel Dekker, New York Frankenberger WT Jr, Arshad M (1995) Phytohormones in soil: microbial production and function. Marcel Dekker, New York
Zurück zum Zitat Gadd GM (2004) Microbial influence on metal mobility and application for bioremediation. Geoderma 122:109–119CrossRef Gadd GM (2004) Microbial influence on metal mobility and application for bioremediation. Geoderma 122:109–119CrossRef
Zurück zum Zitat Gadd GM (2005) Microorganisms in toxic metal polluted soils. In: Buscot F, Varma A (eds) Microorganisms in soils: roles in genesis and functions. Springer, Berlin, pp 325–356CrossRef Gadd GM (2005) Microorganisms in toxic metal polluted soils. In: Buscot F, Varma A (eds) Microorganisms in soils: roles in genesis and functions. Springer, Berlin, pp 325–356CrossRef
Zurück zum Zitat Gadd GM (2010) Metals: minerals and microbes: geomicrobiology and bioremediation. Microbiology 156:609–643CrossRef Gadd GM (2010) Metals: minerals and microbes: geomicrobiology and bioremediation. Microbiology 156:609–643CrossRef
Zurück zum Zitat Garcia de Salamon IE, Hynes RK, Nelson LM (2001) Cytokinin production by plant growth promoting rhizobacteria and selected mutants. Can J Microbiol 47:404–411CrossRef Garcia de Salamon IE, Hynes RK, Nelson LM (2001) Cytokinin production by plant growth promoting rhizobacteria and selected mutants. Can J Microbiol 47:404–411CrossRef
Zurück zum Zitat Glick BR (1995) The enhancement of plant growth by free-living bacteria. Can J Microbiol 41:109–117CrossRef Glick BR (1995) The enhancement of plant growth by free-living bacteria. Can J Microbiol 41:109–117CrossRef
Zurück zum Zitat Glick BR (2010) Using soil bacteria to facilitate phytoremediation. Biotechnol Adv 28:367–374CrossRef Glick BR (2010) Using soil bacteria to facilitate phytoremediation. Biotechnol Adv 28:367–374CrossRef
Zurück zum Zitat Glick BR (2014) Bacteria with ACC deaminase can promote plant growth and help to feed the world. Microbiol Res 169:30–39CrossRef Glick BR (2014) Bacteria with ACC deaminase can promote plant growth and help to feed the world. Microbiol Res 169:30–39CrossRef
Zurück zum Zitat Glick BR, Karaturovic DM, Newell PC (1995) A novel procedure for rapid isolation of plant growth promoting pseudomonas. Can J Microbiol 41:533–536CrossRef Glick BR, Karaturovic DM, Newell PC (1995) A novel procedure for rapid isolation of plant growth promoting pseudomonas. Can J Microbiol 41:533–536CrossRef
Zurück zum Zitat Göhre V, Paszkowski U (2006) Contribution of the arbuscular mycorrhizal symbiosis to heavy metal phytoremediation. Planta 223:1115–1122CrossRef Göhre V, Paszkowski U (2006) Contribution of the arbuscular mycorrhizal symbiosis to heavy metal phytoremediation. Planta 223:1115–1122CrossRef
Zurück zum Zitat Griffiths BS, Ritz K, Bardgett RD, Cook R, Christensen S, Ekelund F, Sørensen SJ, Bååth E, Bloem J, De Ruiter PC, Dolfing J, Nicolardot B (2000) Ecosystem response of pasture soil communities to fumigation-induced microbial diversity reductions: an examination of the biodiversity–ecosystem function relationship. Oikos 90:279–294CrossRef Griffiths BS, Ritz K, Bardgett RD, Cook R, Christensen S, Ekelund F, Sørensen SJ, Bååth E, Bloem J, De Ruiter PC, Dolfing J, Nicolardot B (2000) Ecosystem response of pasture soil communities to fumigation-induced microbial diversity reductions: an examination of the biodiversity–ecosystem function relationship. Oikos 90:279–294CrossRef
Zurück zum Zitat Griffiths BS, Ritz K, Wheatley R, Kuan HL, Boag B, Christensen S, Ekelund F, Sørensen SJ, Muller S, Bloem J (2001) An examination of the biodiversity–ecosystem function relationship in arable soil microbial communities. Soil Biol Biochem 33:1713–1722CrossRef Griffiths BS, Ritz K, Wheatley R, Kuan HL, Boag B, Christensen S, Ekelund F, Sørensen SJ, Muller S, Bloem J (2001) An examination of the biodiversity–ecosystem function relationship in arable soil microbial communities. Soil Biol Biochem 33:1713–1722CrossRef
Zurück zum Zitat Guiffre L, Romaniuk R, Conti ME, Bartoloni N (2006) Multivariate evaluation by quality indicators of no-tillage system in Argiudolls of rolling pampa (Argentina). Biol Fertil Soils 42:556–560CrossRef Guiffre L, Romaniuk R, Conti ME, Bartoloni N (2006) Multivariate evaluation by quality indicators of no-tillage system in Argiudolls of rolling pampa (Argentina). Biol Fertil Soils 42:556–560CrossRef
Zurück zum Zitat He H, Ye Z, Yang D, Yan J, Xiao L, Zhong T, Yuan M, Cai X, Fang Z, Jing Y (2013) Characterization of endophytic Rahnella sp. JN6 from Polygonum pubescens and its potential in promoting growth and Cd, Pb, Zn uptake by Brassica napus. Chemosphere 90:1960–1965CrossRef He H, Ye Z, Yang D, Yan J, Xiao L, Zhong T, Yuan M, Cai X, Fang Z, Jing Y (2013) Characterization of endophytic Rahnella sp. JN6 from Polygonum pubescens and its potential in promoting growth and Cd, Pb, Zn uptake by Brassica napus. Chemosphere 90:1960–1965CrossRef
Zurück zum Zitat Hector A, Schmid B, Beierkuhnlein C, Caldeira MC, Diemer M, Dimitrakopoulos PG, Finn JA, Freitas H, Giller PS, Good J, Harris R, Högberg P, Huss-Danell K, Joshi J, Jumpponen A, Körner C, Leadley PW, Loreau M, Minns A, Mulder CPH, O’Donovan G, Otway SJ, Pereira JS, Prinz A, Read DJ, Scherer-Lorenzen M, Schulze ED, Siamantziouras ASD, Spehn EM, Terry AC, Troumbis AY, Woodward FI, Yachi S, Lawton JH (1999) Plant diversity and productivity experiments in European grassland. Science 286:1123–1127CrossRef Hector A, Schmid B, Beierkuhnlein C, Caldeira MC, Diemer M, Dimitrakopoulos PG, Finn JA, Freitas H, Giller PS, Good J, Harris R, Högberg P, Huss-Danell K, Joshi J, Jumpponen A, Körner C, Leadley PW, Loreau M, Minns A, Mulder CPH, O’Donovan G, Otway SJ, Pereira JS, Prinz A, Read DJ, Scherer-Lorenzen M, Schulze ED, Siamantziouras ASD, Spehn EM, Terry AC, Troumbis AY, Woodward FI, Yachi S, Lawton JH (1999) Plant diversity and productivity experiments in European grassland. Science 286:1123–1127CrossRef
Zurück zum Zitat Hooper DU (1998) The role of complementarity and competition in ecosystem responses to variation in plant diversity. Ecology 79:704–719CrossRef Hooper DU (1998) The role of complementarity and competition in ecosystem responses to variation in plant diversity. Ecology 79:704–719CrossRef
Zurück zum Zitat Hughes JB, Hellmann JJ, Ricketts TH, Bohannan BJM (2001) Minireview: counting the uncountable: statistical approaches to estimating microbial diversity. Appl Environ Microbiol 67:4399–4406CrossRef Hughes JB, Hellmann JJ, Ricketts TH, Bohannan BJM (2001) Minireview: counting the uncountable: statistical approaches to estimating microbial diversity. Appl Environ Microbiol 67:4399–4406CrossRef
Zurück zum Zitat Kebede YK, Kebedee T (2012) Application of principal component analysis in surface water quality monitoring. In: Sanguansat P.(Ed.), Principal component analysis – engineering applications. In Tech Kebede YK, Kebedee T (2012) Application of principal component analysis in surface water quality monitoring. In: Sanguansat P.(Ed.), Principal component analysis – engineering applications. In Tech
Zurück zum Zitat Khan AG (2005) Role of soil microbes in the rhizospheres of plants growing on trace metal contaminated soils in phytoremediation. J Trace Elem Med Biol 18:355–364CrossRef Khan AG (2005) Role of soil microbes in the rhizospheres of plants growing on trace metal contaminated soils in phytoremediation. J Trace Elem Med Biol 18:355–364CrossRef
Zurück zum Zitat Khan MS, Zaidi A, Aamil M (2002) Biocontrol of fungal pathogens by the use of plant growth promoting rhizobacteria and nitrogen fixing microorganisms. Indian J Bot Soc 81:255–263 Khan MS, Zaidi A, Aamil M (2002) Biocontrol of fungal pathogens by the use of plant growth promoting rhizobacteria and nitrogen fixing microorganisms. Indian J Bot Soc 81:255–263
Zurück zum Zitat Khan MS, Zaidi A, Wani PA, Ahemad M, Oves M (2009) Functional diversity among plant growth-promoting rhizobacteria: current status. In: Khan MS (ed) Microbial strategies for crop improvement. Springer, Berlin/HeidelbergCrossRef Khan MS, Zaidi A, Wani PA, Ahemad M, Oves M (2009) Functional diversity among plant growth-promoting rhizobacteria: current status. In: Khan MS (ed) Microbial strategies for crop improvement. Springer, Berlin/HeidelbergCrossRef
Zurück zum Zitat Kidd P, Barcelo J, Bernal MP, Navari-Izzo F, Poschenrieder C, Shilev S, Rafael C, Monterroso C (2009) Trace element behaviour at the root-soil interface: implications in phytoremediation. Environ Exp Bot 67:243–259CrossRef Kidd P, Barcelo J, Bernal MP, Navari-Izzo F, Poschenrieder C, Shilev S, Rafael C, Monterroso C (2009) Trace element behaviour at the root-soil interface: implications in phytoremediation. Environ Exp Bot 67:243–259CrossRef
Zurück zum Zitat Kirk JL, Beaudette LA, Hart M, Moutoglis P, Klironomos JN, Lee H, Trevors JA (2004) Methods of studying soil microbial diversity. J Microbiol Meth 58:169–188CrossRef Kirk JL, Beaudette LA, Hart M, Moutoglis P, Klironomos JN, Lee H, Trevors JA (2004) Methods of studying soil microbial diversity. J Microbiol Meth 58:169–188CrossRef
Zurück zum Zitat Kloepper JW, Schroth MN (1978) Plant growth-promoting rhizobacteria on radishes. Fourth International Conference on Plant Pathogen Bacteria, Angers, France, Vol 2. pp 879–882 Kloepper JW, Schroth MN (1978) Plant growth-promoting rhizobacteria on radishes. Fourth International Conference on Plant Pathogen Bacteria, Angers, France, Vol 2. pp 879–882
Zurück zum Zitat Kremer RJ, Begonia MFT, Lynn S, Lanham ET (1990) Characterization of rhizobacteria associated with weed seedlings. Appl Environ Microbiol 56:1646–1655 Kremer RJ, Begonia MFT, Lynn S, Lanham ET (1990) Characterization of rhizobacteria associated with weed seedlings. Appl Environ Microbiol 56:1646–1655
Zurück zum Zitat Lebeau T, Braud A, Jezequel K (2008) Performance of bioaugmentation-assisted phytoextraction applied to metal contaminated soils: a review. Environ Pollut 153:497–522CrossRef Lebeau T, Braud A, Jezequel K (2008) Performance of bioaugmentation-assisted phytoextraction applied to metal contaminated soils: a review. Environ Pollut 153:497–522CrossRef
Zurück zum Zitat Leishman MR, Westoby M (1992) Classifying plants into groups on the basis of associations of individual traits - evidence from Australian semi-arid woodlands. J Ecol 80:417–424CrossRef Leishman MR, Westoby M (1992) Classifying plants into groups on the basis of associations of individual traits - evidence from Australian semi-arid woodlands. J Ecol 80:417–424CrossRef
Zurück zum Zitat Lugtenberg B, Kamilova F (2009) Plant-growth-promoting rhizobacteria. Annu Rev Microbiol 63:541–556CrossRef Lugtenberg B, Kamilova F (2009) Plant-growth-promoting rhizobacteria. Annu Rev Microbiol 63:541–556CrossRef
Zurück zum Zitat Luo SL, Chen L, Chen JL, Xiao X, Xu TY, Wan Y, Rao C, Liu C, Liu Y, Lai C, Zeng GM (2011) Analysis and characterization of cultivable heavy metal-resistant bacterial endophytes isolated from Cd-hyperaccumulator Solanum nigrum L. and their potential use for phytoremediation. Chemosphere 85:1130–1138CrossRef Luo SL, Chen L, Chen JL, Xiao X, Xu TY, Wan Y, Rao C, Liu C, Liu Y, Lai C, Zeng GM (2011) Analysis and characterization of cultivable heavy metal-resistant bacterial endophytes isolated from Cd-hyperaccumulator Solanum nigrum L. and their potential use for phytoremediation. Chemosphere 85:1130–1138CrossRef
Zurück zum Zitat Ma Y, Rajkumar M, Luo YM, Freitas H (2011) Inoculation of endophytic bacteria on host and non-host plants e effects on plant growth and Ni uptake. J Hazard Mater 195:230–237CrossRef Ma Y, Rajkumar M, Luo YM, Freitas H (2011) Inoculation of endophytic bacteria on host and non-host plants e effects on plant growth and Ni uptake. J Hazard Mater 195:230–237CrossRef
Zurück zum Zitat Ma Y, Oliveira RS, Nai FJ, Rajkumar M, Luo YM, Rocha I, Freitas H (2015a) The hyperaccumulator Sedum plumbizincicola harbors metal-resistant endophytic bacteria that improve its phytoextraction capacity in multi-metal contaminated soil. J Environ Manag 156:62–69CrossRef Ma Y, Oliveira RS, Nai FJ, Rajkumar M, Luo YM, Rocha I, Freitas H (2015a) The hyperaccumulator Sedum plumbizincicola harbors metal-resistant endophytic bacteria that improve its phytoextraction capacity in multi-metal contaminated soil. J Environ Manag 156:62–69CrossRef
Zurück zum Zitat Ma Y, Rajkumar M, Rocha I, Oliveira RS, Freitas H (2015b) Serpentine bacteria influence metal translocation and bioconcentration of Brassica juncea and Ricinus communis grown in multi-metal polluted soils. Front Plant Sci 5:1–13CrossRef Ma Y, Rajkumar M, Rocha I, Oliveira RS, Freitas H (2015b) Serpentine bacteria influence metal translocation and bioconcentration of Brassica juncea and Ricinus communis grown in multi-metal polluted soils. Front Plant Sci 5:1–13CrossRef
Zurück zum Zitat Ma Y, Rajkumar M, Zhang C, Freitas H (2016) Beneficial role of bacterial endophytes in heavy metal phytoremediation. J Environ Manag 174:14–25CrossRef Ma Y, Rajkumar M, Zhang C, Freitas H (2016) Beneficial role of bacterial endophytes in heavy metal phytoremediation. J Environ Manag 174:14–25CrossRef
Zurück zum Zitat Mahmoud SAZ, Ramadan EM, Thabet FM, Khater T (1984) Production of plant growth promoting substances by rhizosphere microorganisms. Zbl Mikrobiol 139:227–232 Mahmoud SAZ, Ramadan EM, Thabet FM, Khater T (1984) Production of plant growth promoting substances by rhizosphere microorganisms. Zbl Mikrobiol 139:227–232
Zurück zum Zitat Maropola MK, Ramond JB, Trindade M (2015) Impact of metagenomic DNA extraction procedures on the identifiable endophytic bacterial diversity in Sorghum bicolor (L. Moench). J Microbiol Methods 112:104–117CrossRef Maropola MK, Ramond JB, Trindade M (2015) Impact of metagenomic DNA extraction procedures on the identifiable endophytic bacterial diversity in Sorghum bicolor (L. Moench). J Microbiol Methods 112:104–117CrossRef
Zurück zum Zitat Mason NWH, MacGillivray K, Steel JB, Wilson JB (2003) An index of functional diversity. J Veg Sci 14:571–578CrossRef Mason NWH, MacGillivray K, Steel JB, Wilson JB (2003) An index of functional diversity. J Veg Sci 14:571–578CrossRef
Zurück zum Zitat Muehe EM, Weigold P, Adaktylou IJ, Planer-Friedrich B, Kraemer U, Kappler A, Behrens S (2015) Rhizosphere microbial community composition affects cadmium and zinc uptake of the metal-hyperaccumulating plant Arabidopsis halleri. Appl Environ Microbiol 81:2173–2181CrossRef Muehe EM, Weigold P, Adaktylou IJ, Planer-Friedrich B, Kraemer U, Kappler A, Behrens S (2015) Rhizosphere microbial community composition affects cadmium and zinc uptake of the metal-hyperaccumulating plant Arabidopsis halleri. Appl Environ Microbiol 81:2173–2181CrossRef
Zurück zum Zitat Naeem S, Li S (1997) Biodiversity enhances ecosystem reliability. Nature 390:507–509CrossRef Naeem S, Li S (1997) Biodiversity enhances ecosystem reliability. Nature 390:507–509CrossRef
Zurück zum Zitat Naik RP, Sakthivel N (2006) Functional characterization of a novel hydrocarbonoclastic Pseudomonas sp. strain PUP6 with plant-growth-promoting traits and antifungal potential. Res Microbiol 157:538–546CrossRef Naik RP, Sakthivel N (2006) Functional characterization of a novel hydrocarbonoclastic Pseudomonas sp. strain PUP6 with plant-growth-promoting traits and antifungal potential. Res Microbiol 157:538–546CrossRef
Zurück zum Zitat Naik PR, Raman G, Narayanan KB, Sakthivel N (2008) Assessment of genetic and functional diversity of phosphate solubilizing fluorescent pseudomonads isolated from rhizospheric soil. BMC Microbiol 8:230CrossRef Naik PR, Raman G, Narayanan KB, Sakthivel N (2008) Assessment of genetic and functional diversity of phosphate solubilizing fluorescent pseudomonads isolated from rhizospheric soil. BMC Microbiol 8:230CrossRef
Zurück zum Zitat Ortega-Acosta O (2015) Análisis de la diversidad funcional de fitobacterias de plantas de Lemna gibba presente en tres sitios contrastantes del Sistema lacustre de Xochimilco. Tesis de Maestría. Escuela Nacional de CienciasBiológicas, InstitutoPolitécnico Nacional, Ciudad de México, México Ortega-Acosta O (2015) Análisis de la diversidad funcional de fitobacterias de plantas de Lemna gibba presente en tres sitios contrastantes del Sistema lacustre de Xochimilco. Tesis de Maestría. Escuela Nacional de CienciasBiológicas, InstitutoPolitécnico Nacional, Ciudad de México, México
Zurück zum Zitat Ortega-Acosta O, Rodriguez-Tovar AV, López-López E, Rodríguez-Dorantes A (2015) Characterization of indole acetic acid endophyte producers in authoctonus Lemna gibba plants from Xochimilco Lake. Afr J Biotechnol 14:604–611 Ortega-Acosta O, Rodriguez-Tovar AV, López-López E, Rodríguez-Dorantes A (2015) Characterization of indole acetic acid endophyte producers in authoctonus Lemna gibba plants from Xochimilco Lake. Afr J Biotechnol 14:604–611
Zurück zum Zitat O’Sullivan DJ, O’Hara F (1992) Traits of fluorescent Pseudomonas spp. involved in suppression of plant root pathogens. Microbiol Rev 56:662–676 O’Sullivan DJ, O’Hara F (1992) Traits of fluorescent Pseudomonas spp. involved in suppression of plant root pathogens. Microbiol Rev 56:662–676
Zurück zum Zitat Ovreas L (2000) Population and community level approaches for analyzing microbial diversity in natural environments. Ecol Lett 3:236–251CrossRef Ovreas L (2000) Population and community level approaches for analyzing microbial diversity in natural environments. Ecol Lett 3:236–251CrossRef
Zurück zum Zitat Pace NR (1997) A molecular view of microbial diversity and the biosphere. Science 276:734–740CrossRef Pace NR (1997) A molecular view of microbial diversity and the biosphere. Science 276:734–740CrossRef
Zurück zum Zitat Petchey OL, Gaston KJ (2002a) Functional diversity (FD), species richness and community composition. Ecol Lett 5:402–411CrossRef Petchey OL, Gaston KJ (2002a) Functional diversity (FD), species richness and community composition. Ecol Lett 5:402–411CrossRef
Zurück zum Zitat Petchey OL, Gaston KJ (2002b) Extinction and the loss of functional diversity. Proc R Soc Lond Ser B Biol Sci 269:1721–1727CrossRef Petchey OL, Gaston KJ (2002b) Extinction and the loss of functional diversity. Proc R Soc Lond Ser B Biol Sci 269:1721–1727CrossRef
Zurück zum Zitat Petchey OL, Gaston KJ (2006) Functional diversity: back to basics and looking forward. Ecol Lett 9:741–775CrossRef Petchey OL, Gaston KJ (2006) Functional diversity: back to basics and looking forward. Ecol Lett 9:741–775CrossRef
Zurück zum Zitat Phetcharat P, Duangpaeng A (2012) Screening of endophytic bacteria from organic rice tissue for indole acetic acid production. Procedia Eng 32:177–183CrossRef Phetcharat P, Duangpaeng A (2012) Screening of endophytic bacteria from organic rice tissue for indole acetic acid production. Procedia Eng 32:177–183CrossRef
Zurück zum Zitat Ramamoorthy V, Viswanathan R, Raguchander T, Prakasam V, Samiyappan R (2001) Induction of systemic resistance by plant growth promoting rhizobacteria in crop plants against pests and diseases. Crop Prot 20:1–11CrossRef Ramamoorthy V, Viswanathan R, Raguchander T, Prakasam V, Samiyappan R (2001) Induction of systemic resistance by plant growth promoting rhizobacteria in crop plants against pests and diseases. Crop Prot 20:1–11CrossRef
Zurück zum Zitat Rastetter EB, Gough L, Hartley AE, Herbert DA, Nadelhoffer KJ, Williams M (1999) A revised assessment of species redundancy and ecosystem reliability. Conserv Biol 13:440–443CrossRef Rastetter EB, Gough L, Hartley AE, Herbert DA, Nadelhoffer KJ, Williams M (1999) A revised assessment of species redundancy and ecosystem reliability. Conserv Biol 13:440–443CrossRef
Zurück zum Zitat Renwick A, Campbell R, Coe S (1991) Assessment of in vivo screening systems for potential biocontrol agents of Gaeumannomyces graminis. Plant Pathol 40:524–532CrossRef Renwick A, Campbell R, Coe S (1991) Assessment of in vivo screening systems for potential biocontrol agents of Gaeumannomyces graminis. Plant Pathol 40:524–532CrossRef
Zurück zum Zitat Ricotta C (2005) A note on functional diversity measures. Basic Appl Ecol 6:479–486CrossRef Ricotta C (2005) A note on functional diversity measures. Basic Appl Ecol 6:479–486CrossRef
Zurück zum Zitat Roscher C, Schumacher J, Baade J, Wilcke W, Gleixner G, Weisser WW, Schmid B, Schulze ED (2004) The role of biodiversity for element cycling and trophic interactions: and experimental approach in a grassland community. Basic Appl Ecol 5:107–112CrossRef Roscher C, Schumacher J, Baade J, Wilcke W, Gleixner G, Weisser WW, Schmid B, Schulze ED (2004) The role of biodiversity for element cycling and trophic interactions: and experimental approach in a grassland community. Basic Appl Ecol 5:107–112CrossRef
Zurück zum Zitat Schulz B, Boyle C (2006) What are endophytes? In: Schulz BJE, Boyle CIC, Sieber TN (eds) Microbial root endophytes. Springer, Berlin, pp 1–13CrossRef Schulz B, Boyle C (2006) What are endophytes? In: Schulz BJE, Boyle CIC, Sieber TN (eds) Microbial root endophytes. Springer, Berlin, pp 1–13CrossRef
Zurück zum Zitat Sessitsch A, Kuffner M, Kidd P, Vangronsveld J, Wenzel WW, Fallmann K, Puschenreiter M (2013) The role of plant-associated bacteria in the mobilization and phytoextraction of trace elements in contaminated soils. Soil Biol Biochem 60:182–194CrossRef Sessitsch A, Kuffner M, Kidd P, Vangronsveld J, Wenzel WW, Fallmann K, Puschenreiter M (2013) The role of plant-associated bacteria in the mobilization and phytoextraction of trace elements in contaminated soils. Soil Biol Biochem 60:182–194CrossRef
Zurück zum Zitat Shanahan P, O’Sullivan DJ, Simpson P, Glennon JD, O’Gara F (1992) Isolation of 2, 4- diacetylphloroglucinol from a fluorescent pseudomonad and investigation of physiological parameters influencing its production. Appl Environ Microbiol 58:353–358 Shanahan P, O’Sullivan DJ, Simpson P, Glennon JD, O’Gara F (1992) Isolation of 2, 4- diacetylphloroglucinol from a fluorescent pseudomonad and investigation of physiological parameters influencing its production. Appl Environ Microbiol 58:353–358
Zurück zum Zitat Sharma M, Mishra V, Rau N, RSH S (2011a) Functionally diverse rhizobacteria of Saccharum munja (a native wild grass) colonizing abandoned morrum mine in Aravalli hills (Delhi). Plant Soil 341:447–459CrossRef Sharma M, Mishra V, Rau N, RSH S (2011a) Functionally diverse rhizobacteria of Saccharum munja (a native wild grass) colonizing abandoned morrum mine in Aravalli hills (Delhi). Plant Soil 341:447–459CrossRef
Zurück zum Zitat Sharma SK, Johri BN, Ramesh A, Joshi OP, Sai Prasad SV (2011b) Selection of plant growth-promoting Pseudomonas spp. that enhanced productivity of soybean-wheat cropping system in Central India. J Microbiol Biotechnol 21:1127–1142CrossRef Sharma SK, Johri BN, Ramesh A, Joshi OP, Sai Prasad SV (2011b) Selection of plant growth-promoting Pseudomonas spp. that enhanced productivity of soybean-wheat cropping system in Central India. J Microbiol Biotechnol 21:1127–1142CrossRef
Zurück zum Zitat Shukla MK, Lal R, Ebinger M (2004) Principal component analysis for predicting corn biomass and grain yield. Soil Sci 169:215–224CrossRef Shukla MK, Lal R, Ebinger M (2004) Principal component analysis for predicting corn biomass and grain yield. Soil Sci 169:215–224CrossRef
Zurück zum Zitat Sokal RR, Sneath PH (1973) Principles of numerical taxonomy. W.H. Freeman and Company, San Francisco Sokal RR, Sneath PH (1973) Principles of numerical taxonomy. W.H. Freeman and Company, San Francisco
Zurück zum Zitat Somers E, Vanderleyden J, Srinivasan M (2004) Rhizosphere bacterial signaling: a love parade beneath our feet. Crit Rev Microbiol 30:205–240CrossRef Somers E, Vanderleyden J, Srinivasan M (2004) Rhizosphere bacterial signaling: a love parade beneath our feet. Crit Rev Microbiol 30:205–240CrossRef
Zurück zum Zitat Stevens RD, Cox SB, Strauss RE, Willig MR (2003) Patterns of functional diversity across an extensive environmental gradient: vertebrate consumers, hidden treatments and latitudinal trends. Ecol Lett 6:1099–1108CrossRef Stevens RD, Cox SB, Strauss RE, Willig MR (2003) Patterns of functional diversity across an extensive environmental gradient: vertebrate consumers, hidden treatments and latitudinal trends. Ecol Lett 6:1099–1108CrossRef
Zurück zum Zitat Sunishkumar R, Ayyadurai N, Pandiaraja P, Reddy AV, Venkateswarlu Y, Prakash O, Sakthivel N (2005) Characterization of antifungal metabolite produced by a new strain Pseudomonas aeruginosa PUPa3 that exhibits broad-spectrum antifungal activity and biofertilizing traits. J Appl Microbiol 98:145–154CrossRef Sunishkumar R, Ayyadurai N, Pandiaraja P, Reddy AV, Venkateswarlu Y, Prakash O, Sakthivel N (2005) Characterization of antifungal metabolite produced by a new strain Pseudomonas aeruginosa PUPa3 that exhibits broad-spectrum antifungal activity and biofertilizing traits. J Appl Microbiol 98:145–154CrossRef
Zurück zum Zitat Tilman D (2001) Functional diversity. In: Levin SA (ed) Encyclopaedia of biodiversity. Academic Press, San Diego, pp 109–120CrossRef Tilman D (2001) Functional diversity. In: Levin SA (ed) Encyclopaedia of biodiversity. Academic Press, San Diego, pp 109–120CrossRef
Zurück zum Zitat Tilman D, Reich PB, Knops J, Wedin D, Mielke T, Lehman CL (2001) Diversity and productivity in a long-term grassland experiment. Science 294:843–845CrossRef Tilman D, Reich PB, Knops J, Wedin D, Mielke T, Lehman CL (2001) Diversity and productivity in a long-term grassland experiment. Science 294:843–845CrossRef
Zurück zum Zitat Trevors JT (1998) Bacterial biodiversity in soil with an emphasis on chemically-contaminated soils. Water Air Soil Pollut 101:45–67CrossRef Trevors JT (1998) Bacterial biodiversity in soil with an emphasis on chemically-contaminated soils. Water Air Soil Pollut 101:45–67CrossRef
Zurück zum Zitat Ullah A, Heng S, Farooq M, Munis H, Fahad S, Yang X (2015) Phytoremediation of heavy metals assisted by plant growth promoting (PGP) bacteria: a review. Environ Exp Bot 117:28–40CrossRef Ullah A, Heng S, Farooq M, Munis H, Fahad S, Yang X (2015) Phytoremediation of heavy metals assisted by plant growth promoting (PGP) bacteria: a review. Environ Exp Bot 117:28–40CrossRef
Zurück zum Zitat Villegas J, Fortin JA (2001) Phosphorus solubilization and pH changes as a result of the interactions between soil bacteria and arbuscular mycorrhizal fungi on a medium containing NO3as nitrogen source. Can J Bot 80:571–576CrossRef Villegas J, Fortin JA (2001) Phosphorus solubilization and pH changes as a result of the interactions between soil bacteria and arbuscular mycorrhizal fungi on a medium containing NO3as nitrogen source. Can J Bot 80:571–576CrossRef
Zurück zum Zitat Visioli G, D’Egidio S, Vamerali T, Mattarozzi M, Sanangelantoni AM (2014) Culturable endophytic bacteria enhance Ni translocation in the hyperaccumulator Noccaea caerulescens. Chemosphere 117:538–544CrossRef Visioli G, D’Egidio S, Vamerali T, Mattarozzi M, Sanangelantoni AM (2014) Culturable endophytic bacteria enhance Ni translocation in the hyperaccumulator Noccaea caerulescens. Chemosphere 117:538–544CrossRef
Zurück zum Zitat Walker B, Kinzig A, Langridge J (1999) Plant attribute diversity, resilience, and ecosystem function: the nature and significance of dominant and minor species. Ecosystems 2:95–113CrossRef Walker B, Kinzig A, Langridge J (1999) Plant attribute diversity, resilience, and ecosystem function: the nature and significance of dominant and minor species. Ecosystems 2:95–113CrossRef
Zurück zum Zitat Wani PA, Khan MS, Zaidi A (2007a) Synergistic effects of the inoculation with nitrogen fixing and phosphate-solubilizing rhizobacteria on the performance of field grown chickpea. J Plant Nutr Soil Sci 170:283–287CrossRef Wani PA, Khan MS, Zaidi A (2007a) Synergistic effects of the inoculation with nitrogen fixing and phosphate-solubilizing rhizobacteria on the performance of field grown chickpea. J Plant Nutr Soil Sci 170:283–287CrossRef
Zurück zum Zitat Wani PA, Khan MS, Zaidi A (2007b) Chromium reduction, plant growth promoting potentials and metal solubilization by Bacillus sp. isolated from alluvial soil. Curr Microbio l54:237–243CrossRef Wani PA, Khan MS, Zaidi A (2007b) Chromium reduction, plant growth promoting potentials and metal solubilization by Bacillus sp. isolated from alluvial soil. Curr Microbio l54:237–243CrossRef
Zurück zum Zitat Wani PA, Khan MS, Zaidi A (2007c) Co inoculation of nitrogen fixing and phosphate solubilizing bacteria to promote growth, yield and nutrient uptake in chickpea. Acta Agron Hung 55:315–323CrossRef Wani PA, Khan MS, Zaidi A (2007c) Co inoculation of nitrogen fixing and phosphate solubilizing bacteria to promote growth, yield and nutrient uptake in chickpea. Acta Agron Hung 55:315–323CrossRef
Zurück zum Zitat Wertz S, Degrange V, Jl P, Poly F, Commeaux C, Freitag T, Guillaumaud N, Le Roux J (2006) Maintenance of soil functioning following erosion of microbial diversity. Environ Microbiol 8:2162–2169CrossRef Wertz S, Degrange V, Jl P, Poly F, Commeaux C, Freitag T, Guillaumaud N, Le Roux J (2006) Maintenance of soil functioning following erosion of microbial diversity. Environ Microbiol 8:2162–2169CrossRef
Zurück zum Zitat Yan-de J, Zhen-li H, Xiao-e Y (2007) Role of soil rhizobacteria in phytoremediation of heavy metal contaminated soils. J Zhejiang Univ Sci B8:192–207 Yan-de J, Zhen-li H, Xiao-e Y (2007) Role of soil rhizobacteria in phytoremediation of heavy metal contaminated soils. J Zhejiang Univ Sci B8:192–207
Zurück zum Zitat Zaidi A (1999) Synergistic interactions of nitrogen fixing microorganisms with phosphate mobilizing microorganisms. PhD thesis, Aligarh Muslim University, Aligarh Zaidi A (1999) Synergistic interactions of nitrogen fixing microorganisms with phosphate mobilizing microorganisms. PhD thesis, Aligarh Muslim University, Aligarh
Zurück zum Zitat Zak JC, Willig MR, Moorhead DL, Wildman HG (1994) Functional diversity of microbial communities. Soil Biol Biochem 26:1101–1108CrossRef Zak JC, Willig MR, Moorhead DL, Wildman HG (1994) Functional diversity of microbial communities. Soil Biol Biochem 26:1101–1108CrossRef
Zurück zum Zitat Zheng YK, Qiao XG, Miao CP, Liu K, Chen YW, Xu LH, Zhao LX (2016) Diversity, distribution and biotechnological potential of endophytic fungi. Ann Microbiol 66:529–542CrossRef Zheng YK, Qiao XG, Miao CP, Liu K, Chen YW, Xu LH, Zhao LX (2016) Diversity, distribution and biotechnological potential of endophytic fungi. Ann Microbiol 66:529–542CrossRef
Metadaten
Titel
Functional Diversity of Plant Endophytes and Their Role in Assisted Phytoremediation
verfasst von
Angélica Leonor Guerrero-Zúñiga
Eugenia López-López
Aída Verónica Rodríguez-Tovar
Angélica Rodríguez-Dorantes
Copyright-Jahr
2020
Verlag
Springer Singapore
DOI
https://doi.org/10.1007/978-981-13-3426-9_10